Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14h04
(235 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 2.6
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 20 3.5
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 19 6.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 19 6.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 19 8.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 19 8.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 19 8.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 19 8.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 19 8.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 19 8.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 8.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 8.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 19 8.0
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 2.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +3
Query: 15 NLVPTRWYH 41
+LVP WYH
Sbjct: 1523 DLVPATWYH 1531
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.2 bits (40), Expect = 3.5
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = -2
Query: 84 HFHHNHN 64
H++HNHN
Sbjct: 424 HYNHNHN 430
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 19.4 bits (38), Expect = 6.0
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -1
Query: 142 LSRLGGLFM---LPLEKLSYLGTLPSQSQFVG 56
L+ LG L M + +++LS+LG+ S FVG
Sbjct: 243 LTNLGFLGMKESVEVDQLSWLGSGQYISDFVG 274
Score = 19.4 bits (38), Expect = 6.0
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 108 RGSINRPPSLDRKSAIIFKKRNNFTFIYL 194
RG++ PP R++ + K T +Y+
Sbjct: 898 RGTVVSPPPTKRRTMKVVKYHLFLTNLYI 926
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 19.4 bits (38), Expect = 6.0
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = -1
Query: 142 LSRLGGLFM---LPLEKLSYLGTLPSQSQFVG 56
L+ LG L M + +++LS+LG+ S FVG
Sbjct: 281 LTNLGFLGMKESVEVDQLSWLGSGQYISDFVG 312
Score = 19.4 bits (38), Expect = 6.0
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 108 RGSINRPPSLDRKSAIIFKKRNNFTFIYL 194
RG++ PP R++ + K T +Y+
Sbjct: 936 RGTVVSPPPTKRRTMKVVKYHLFLTNLYI 964
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -2
Query: 153 LHFFYLDWEACLCSLSR 103
+ +L W CL +SR
Sbjct: 295 IKMLFLQWLPCLLRMSR 311
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -2
Query: 153 LHFFYLDWEACLCSLSR 103
+ +L W CL +SR
Sbjct: 295 IKMLFLQWLPCLLRMSR 311
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -2
Query: 153 LHFFYLDWEACLCSLSR 103
+ +L W CL +SR
Sbjct: 295 IKMLFLQWLPCLLRMSR 311
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -2
Query: 153 LHFFYLDWEACLCSLSR 103
+ +L W CL +SR
Sbjct: 295 IKMLFLQWLPCLLRMSR 311
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -2
Query: 153 LHFFYLDWEACLCSLSR 103
+ +L W CL +SR
Sbjct: 295 IKMLFLQWLPCLLRMSR 311
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -2
Query: 153 LHFFYLDWEACLCSLSR 103
+ +L W CL +SR
Sbjct: 295 IKMLFLQWLPCLLRMSR 311
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -2
Query: 153 LHFFYLDWEACLCSLSR 103
+ +L W CL +SR
Sbjct: 363 IKMLFLQWLPCLLRMSR 379
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -2
Query: 153 LHFFYLDWEACLCSLSR 103
+ +L W CL +SR
Sbjct: 363 IKMLFLQWLPCLLRMSR 379
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 19.0 bits (37), Expect = 8.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 114 SINRPPSLDRKS 149
S+ PPS+DR S
Sbjct: 54 SMTIPPSIDRSS 65
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,031
Number of Sequences: 438
Number of extensions: 1159
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 3772710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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