Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14h02
         (610 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1345 + 25919379-25920866,25921342-25921962,25922733-259228...    39   0.003
11_01_0281 + 2086674-2087652,2089200-2089483                           28   6.7  
11_01_0277 + 2060328-2061061,2061360-2061420,2061560-2061679,206...    28   6.7  
06_01_0351 + 2537022-2538281                                           28   6.7  
03_01_0283 + 2193632-2195182                                           27   8.8  

>07_03_1345 +
           25919379-25920866,25921342-25921962,25922733-25922893,
           25923284-25923422,25923509-25923592,25923944-25923982,
           25924037-25924222,25924347-25924478,25924810-25925009,
           25925294-25925498,25925618-25925944
          Length = 1193

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = +3

Query: 450 GPKLVVFDASTGTGRLVLVGDERVSVQGMSSFATIRATACVYSAKWMYEVQL 605
           G   VV D S+  G+   +    + V+  +SF++ RA  CV++ KWMYEV L
Sbjct: 104 GQTKVVLDDSSICGKFKSIWGPLL-VESSASFSSARANTCVWNGKWMYEVTL 154


>11_01_0281 + 2086674-2087652,2089200-2089483
          Length = 420

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 414 ASETTDDRIGRIGPKLVVFDASTGTGRLVLVGDERVSVQGMSSFATIRATACVYSAKWMY 593
           A+E  DD      P L V  +       V V D+R++      +  +RAT  V +  W +
Sbjct: 164 AAERNDD-----APDLPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRATRGVAAGAWYF 218

Query: 594 EVQL 605
           EV++
Sbjct: 219 EVKV 222


>11_01_0277 +
           2060328-2061061,2061360-2061420,2061560-2061679,
           2061947-2062112,2062229-2062635
          Length = 495

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 414 ASETTDDRIGRIGPKLVVFDASTGTGRLVLVGDERVSVQGMSSFATIRATACVYSAKWMY 593
           A+E  DD      P L V  +       V V D+R++      +  +RAT  V +  W +
Sbjct: 162 AAERNDD-----APDLPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRATRGVAAGAWYF 216

Query: 594 EVQL 605
           EV++
Sbjct: 217 EVKV 220


>06_01_0351 + 2537022-2538281
          Length = 419

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 474 ASTGTGRLVLVGDERVSVQGMSSFAT 551
           ASTG+G L++ GD  +S+   SS AT
Sbjct: 122 ASTGSGLLIVHGDGMLSLMNPSSLAT 147


>03_01_0283 + 2193632-2195182
          Length = 516

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = +3

Query: 225 KGEVHDTIKRVFGNDMVLKDNGDRQSQRSKYINHVREALPKMLEAKSTQKPKSSKKHVPI 404
           KG+ +  I  V GN +   D    +SQR+K    +  A  +   A+S+ + K+ K  +P+
Sbjct: 101 KGDEYAEIFDVLGNGIFNADGESWRSQRAKAQMLMAGARFRAFAARSS-RDKAEKSLLPL 159

Query: 405 VIDASET 425
           +  A++T
Sbjct: 160 LAHAADT 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,278,956
Number of Sequences: 37544
Number of extensions: 296387
Number of successful extensions: 787
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)