BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14h02
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130632-1|AAI30633.1| 1314|Homo sapiens ring finger protein 123... 62 1e-09
AY744152-1|AAU93470.1| 1314|Homo sapiens ubiquitin ligase protein. 62 1e-09
BC001539-1|AAH01539.1| 266|Homo sapiens dickkopf homolog 1 (Xen... 30 7.3
AY359005-1|AAQ89364.1| 266|Homo sapiens DKK1 protein. 30 7.3
AF261158-1|AAG15544.1| 266|Homo sapiens dickkopf homolog 1 prot... 30 7.3
AF177394-1|AAF02674.1| 266|Homo sapiens dickkopf-1 protein. 30 7.3
AF127563-1|AAD21087.1| 266|Homo sapiens Sk/Dkk-1 protein precur... 30 7.3
AB020315-1|BAA34651.1| 266|Homo sapiens Dickkopf-1 (hdkk-1) pro... 30 7.3
>BC130632-1|AAI30633.1| 1314|Homo sapiens ring finger protein 123
protein.
Length = 1314
Score = 62.5 bits (145), Expect = 1e-09
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +3
Query: 441 GRIGPKLVVFDASTGTGRLVLVGDERVSVQGMSSFATIRATACVYSAKWMYEV 599
GR+GP VV D + G L+LV D+ + V G S+F TIR+T CVY KW+YEV
Sbjct: 87 GRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSNFGTIRSTTCVYKGKWLYEV 139
>AY744152-1|AAU93470.1| 1314|Homo sapiens ubiquitin ligase protein.
Length = 1314
Score = 62.5 bits (145), Expect = 1e-09
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +3
Query: 441 GRIGPKLVVFDASTGTGRLVLVGDERVSVQGMSSFATIRATACVYSAKWMYEV 599
GR+GP VV D + G L+LV D+ + V G S+F TIR+T CVY KW+YEV
Sbjct: 87 GRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSNFGTIRSTTCVYKGKWLYEV 139
>BC001539-1|AAH01539.1| 266|Homo sapiens dickkopf homolog 1
(Xenopus laevis) protein.
Length = 266
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 201 GVCSGSAE---KGEVHDTIKRVFGNDMVLKDNGDRQSQRSKYINHVR 332
G+C S + +GE+ +TI FGND D R++ S + H +
Sbjct: 136 GICVSSDQNHFRGEIEETITESFGNDHSTLDGYSRRTTLSSKMYHTK 182
>AY359005-1|AAQ89364.1| 266|Homo sapiens DKK1 protein.
Length = 266
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 201 GVCSGSAE---KGEVHDTIKRVFGNDMVLKDNGDRQSQRSKYINHVR 332
G+C S + +GE+ +TI FGND D R++ S + H +
Sbjct: 136 GICVSSDQNHFRGEIEETITESFGNDHSTLDGYSRRTTLSSKMYHTK 182
>AF261158-1|AAG15544.1| 266|Homo sapiens dickkopf homolog 1
protein.
Length = 266
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 201 GVCSGSAE---KGEVHDTIKRVFGNDMVLKDNGDRQSQRSKYINHVR 332
G+C S + +GE+ +TI FGND D R++ S + H +
Sbjct: 136 GICVSSDQNHFRGEIEETITESFGNDHSTLDGYSRRTTLSSKMYHTK 182
>AF177394-1|AAF02674.1| 266|Homo sapiens dickkopf-1 protein.
Length = 266
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 201 GVCSGSAE---KGEVHDTIKRVFGNDMVLKDNGDRQSQRSKYINHVR 332
G+C S + +GE+ +TI FGND D R++ S + H +
Sbjct: 136 GICVSSDQNHFRGEIEETITESFGNDHSTLDGYSRRTTLSSKMYHTK 182
>AF127563-1|AAD21087.1| 266|Homo sapiens Sk/Dkk-1 protein precursor
protein.
Length = 266
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 201 GVCSGSAE---KGEVHDTIKRVFGNDMVLKDNGDRQSQRSKYINHVR 332
G+C S + +GE+ +TI FGND D R++ S + H +
Sbjct: 136 GICVSSDQNHFRGEIEETITESFGNDHSTLDGYSRRTTLSSKMYHTK 182
>AB020315-1|BAA34651.1| 266|Homo sapiens Dickkopf-1 (hdkk-1)
protein.
Length = 266
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 201 GVCSGSAE---KGEVHDTIKRVFGNDMVLKDNGDRQSQRSKYINHVR 332
G+C S + +GE+ +TI FGND D R++ S + H +
Sbjct: 136 GICVSSDQNHFRGEIEETITESFGNDHSTLDGYSRRTTLSSKMYHTK 182
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,462,052
Number of Sequences: 237096
Number of extensions: 1626097
Number of successful extensions: 4340
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4337
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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