Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14g21
(308 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 24 0.48
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 22 1.5
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 1.9
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 1.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 1.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 2.6
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 4.5
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 4.5
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 4.5
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 21 4.5
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 21 4.5
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 4.5
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 20 5.9
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 20 7.8
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.8 bits (49), Expect = 0.48
Identities = 7/31 (22%), Positives = 17/31 (54%)
Frame = +2
Query: 5 TGNFIITYKKIFIYNMAIIKWLSFNCMLLML 97
TG ++ TY + ++ ++ W+ F ++ L
Sbjct: 43 TGRYMFTYLHLLYQDVHVMIWIGFGFLMTFL 73
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 22.2 bits (45), Expect = 1.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 225 CEHSCHISILKLEHVETH*SIMQYLGL*YHYAT 127
C +SC + H+++H ++ QY YAT
Sbjct: 22 CSYSCVNKSMLNSHLKSHSNVYQYRCANCTYAT 54
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 1.9
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 2 ITGNFIITYKKIFIYNMAI-IKWLSFNCM 85
+ N II I +N + +W++FNC+
Sbjct: 99 LVANLIILPVAISFFNDDLSTRWIAFNCL 127
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 1.9
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 2 ITGNFIITYKKIFIYNMAI-IKWLSFNCM 85
+ N II I +N + +W++FNC+
Sbjct: 99 LVANLIILPVAISFFNDDLSTRWIAFNCL 127
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 1.9
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 2 ITGNFIITYKKIFIYNMAI-IKWLSFNCM 85
+ N II I +N + +W++FNC+
Sbjct: 99 LVANLIILPVAISFFNDDLSTRWIAFNCL 127
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 2.6
Identities = 6/20 (30%), Positives = 15/20 (75%)
Frame = -1
Query: 107 YFLITLKAYN*TIAILLLPY 48
YF+++L + +A+L++P+
Sbjct: 223 YFIVSLAVADLLVAVLVMPF 242
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 20.6 bits (41), Expect = 4.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 23 TYKKIFIYNMAIIKWLSFNCM 85
T +F+ N+AI +L CM
Sbjct: 85 TPSNLFVINLAISNFLMMFCM 105
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 20.6 bits (41), Expect = 4.5
Identities = 6/20 (30%), Positives = 15/20 (75%)
Frame = -1
Query: 107 YFLITLKAYN*TIAILLLPY 48
+F+++L + +AIL++P+
Sbjct: 73 FFIVSLAVADLAVAILVMPF 92
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 20.6 bits (41), Expect = 4.5
Identities = 6/20 (30%), Positives = 15/20 (75%)
Frame = -1
Query: 107 YFLITLKAYN*TIAILLLPY 48
+F+++L + +AIL++P+
Sbjct: 73 FFIVSLAVADLAVAILVMPF 92
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 20.6 bits (41), Expect = 4.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 236 CKQCIEIHQSTSDSL 280
CK+C EI + D L
Sbjct: 75 CKKCTEIQKQNLDKL 89
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 20.6 bits (41), Expect = 4.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 236 CKQCIEIHQSTSDSL 280
CK+C EI + D L
Sbjct: 75 CKKCTEIQKQNLDKL 89
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 20.6 bits (41), Expect = 4.5
Identities = 6/20 (30%), Positives = 15/20 (75%)
Frame = -1
Query: 107 YFLITLKAYN*TIAILLLPY 48
+F+++L + +AIL++P+
Sbjct: 73 FFIVSLAVADLAVAILVMPF 92
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 20.2 bits (40), Expect = 5.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 23 TYKKIFIYNMAIIKWLSFNCM 85
T +F+ N+AI +L CM
Sbjct: 51 TPSNLFVINLAISDFLMMFCM 71
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 19.8 bits (39), Expect = 7.8
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = -2
Query: 76 KR*PFYYCHIINKNLFIS 23
KR P Y C +++ ++++
Sbjct: 78 KRIPLYVCRVLHTTVWVA 95
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,823
Number of Sequences: 438
Number of extensions: 1621
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6471036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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