Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14g03
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 118 4e-27
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 118 5e-27
08_02_0774 - 21047696-21048889 115 4e-26
01_06_1220 + 35493575-35494765 112 2e-25
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 102 2e-22
03_06_0127 - 31872840-31872912,31873021-31873115,31873199-318732... 102 3e-22
07_03_1371 - 26100553-26101767 101 5e-22
09_02_0535 - 10346395-10346705,10347100-10347175,10348931-103490... 30 1.4
05_01_0517 + 4403644-4403796,4404025-4404307,4404324-4404749,440... 29 3.1
01_06_1100 + 34530132-34530485,34530544-34530705 29 3.1
07_03_1187 + 24667044-24667091,24667196-24667274,24667520-246676... 28 7.2
01_04_0119 - 16230375-16231093,16231298-16231378,16231634-16231997 28 7.2
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 27 9.6
06_03_0588 + 22567820-22570802,22570917-22571269 27 9.6
03_04_0149 - 17716538-17716597,17718117-17718242 27 9.6
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 118 bits (284), Expect = 4e-27
Identities = 51/158 (32%), Positives = 93/158 (58%)
Frame = +2
Query: 167 QVTVVGATSEVGQVXXXXXXXXXXITKLVVHDNKEFTPGVTLDLSQIPSPSRILGLTGED 346
+V ++GA +GQ ++ L ++D TPGV D+S I +P+++ G G+D
Sbjct: 29 KVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAG-TPGVAADVSHINAPAQVKGFMGDD 87
Query: 347 TLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISKLGRSCPIPFVGIVTEPI 526
L AL+ SD++I G+ ++P ++ L N+ +K++ + + + CP V +++ P+
Sbjct: 88 QLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPNALVNMISNPV 147
Query: 527 NYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYA 640
N +P+ AE+ + G YDEKKLFG+T +D +R++ YA
Sbjct: 148 NSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYA 185
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 118 bits (283), Expect = 5e-27
Identities = 56/179 (31%), Positives = 98/179 (54%)
Frame = +2
Query: 104 HSIMIVNRRIISSLFTTTRSYQVTVVGATSEVGQVXXXXXXXXXXITKLVVHDNKEFTPG 283
++ + RR SS +V ++GA +GQ ++ L ++D TPG
Sbjct: 8 YAAQALRRRDYSSAAAAAER-KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIAG-TPG 65
Query: 284 VTLDLSQIPSPSRILGLTGEDTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKS 463
V D+S I SP+ + G GE+ L AL+ SD++I G+ ++P ++ L N+ +K
Sbjct: 66 VAADVSHINSPALVKGFVGEEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKG 125
Query: 464 IISKLGRSCPIPFVGIVTEPINYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYA 640
+ + + + CP V +++ P+N +P+ AE+ + G YDEKKLFG+T +D +R++ YA
Sbjct: 126 LCTAISKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYA 184
>08_02_0774 - 21047696-21048889
Length = 397
Score = 115 bits (276), Expect = 4e-26
Identities = 54/175 (30%), Positives = 95/175 (54%)
Frame = +2
Query: 116 IVNRRIISSLFTTTRSYQVTVVGATSEVGQVXXXXXXXXXXITKLVVHDNKEFTPGVTLD 295
IV + S + SY+V V+GA +GQ +++L ++D GV D
Sbjct: 60 IVPKAKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIAN-VKGVAAD 118
Query: 296 LSQIPSPSRILGLTGEDTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISK 475
LS +PS++L TG L LK D+++ G+ ++P ++ L N+ +KS++
Sbjct: 119 LSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEA 178
Query: 476 LGRSCPIPFVGIVTEPINYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYA 640
+ +CP F+ I++ P+N +P+ AE+++ GVY+ KKLFG+T +D +R+ A
Sbjct: 179 VADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVA 233
>01_06_1220 + 35493575-35494765
Length = 396
Score = 112 bits (270), Expect = 2e-25
Identities = 53/175 (30%), Positives = 94/175 (53%)
Frame = +2
Query: 116 IVNRRIISSLFTTTRSYQVTVVGATSEVGQVXXXXXXXXXXITKLVVHDNKEFTPGVTLD 295
IV + S + SY+V V+GA +GQ ++ L ++D GV D
Sbjct: 60 IVPKANSGSHISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSALHLYDIAN-VKGVAAD 118
Query: 296 LSQIPSPSRILGLTGEDTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISK 475
LS +PS++L TG L LK D+++ G+ ++P ++ L N+ +K+++
Sbjct: 119 LSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKTLVEA 178
Query: 476 LGRSCPIPFVGIVTEPINYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYA 640
+ +CP F+ I++ P+N +P+ AE+++ GVY+ KKLFG+T +D +R+ A
Sbjct: 179 VADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFIA 233
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 102 bits (245), Expect = 2e-22
Identities = 45/159 (28%), Positives = 87/159 (54%)
Frame = +2
Query: 164 YQVTVVGATSEVGQVXXXXXXXXXXITKLVVHDNKEFTPGVTLDLSQIPSPSRILGLTGE 343
++V ++GA+ +GQ ++ L ++D TPGVT D+S + + + + G G+
Sbjct: 58 FKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVN-TPGVTADISHMNTGAVVRGFLGQ 116
Query: 344 DTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISKLGRSCPIPFVGIVTEP 523
LE AL DL+I G+ ++P ++ L N+ ++++ + + CP V +++ P
Sbjct: 117 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNP 176
Query: 524 INYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYA 640
+N +P+ AE+ + G YD K+L G+T +D +R+ A
Sbjct: 177 VNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVA 215
>03_06_0127 -
31872840-31872912,31873021-31873115,31873199-31873288,
31873364-31873399,31874039-31874122,31874223-31874312,
31874426-31874740,31875674-31875883,31875965-31876036
Length = 354
Score = 102 bits (244), Expect = 3e-22
Identities = 48/159 (30%), Positives = 85/159 (53%)
Frame = +2
Query: 164 YQVTVVGATSEVGQVXXXXXXXXXXITKLVVHDNKEFTPGVTLDLSQIPSPSRILGLTGE 343
++V V+GA +GQ ++ L ++D TPGVT D+S + + + + G G
Sbjct: 43 FKVAVLGAAGGIGQPLSLLMKLNPLVSVLHLYDVVN-TPGVTADVSHMDTTAVVRGFLGP 101
Query: 344 DTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISKLGRSCPIPFVGIVTEP 523
+ LE AL DL+I GL ++P ++ L N+ ++S+ + + CP V +++ P
Sbjct: 102 NQLEAALTGMDLVIIPAGLPRKPGMTRDDLFNKNAGIVRSLCEGVAKCCPNAIVNLISNP 161
Query: 524 INYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYA 640
+N +P+ AE+ + G YD K+L G+T +D R+ A
Sbjct: 162 VNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVARANTFVA 200
>07_03_1371 - 26100553-26101767
Length = 404
Score = 101 bits (242), Expect = 5e-22
Identities = 45/172 (26%), Positives = 89/172 (51%)
Frame = +2
Query: 125 RRIISSLFTTTRSYQVTVVGATSEVGQVXXXXXXXXXXITKLVVHDNKEFTPGVTLDLSQ 304
RR + + Y+V ++GA +GQ ++ L ++D GVT DL
Sbjct: 65 RRAGNRVVAQAGGYKVAILGAAGGIGQPLSLLVKMSPLVSALHLYDIAN-VDGVTADLGH 123
Query: 305 IPSPSRILGLTGEDTLERALKNSDLIIAAGGLSQRPDISEKALLTANSQFIKSIISKLGR 484
+P+++ G TG++ L L D+++ G+ ++P ++ L N+ ++ ++ +
Sbjct: 124 CNTPAKVAGFTGKEELAGCLAGVDVVVIPAGVPRKPGMTRDDLFGINAGIVRELVEAVAD 183
Query: 485 SCPIPFVGIVTEPINYLIPMTAEIMRNHGVYDEKKLFGITEIDAIRSQCLYA 640
P V +++ P+N +P+ AE+++ GVYD +KLFG+T +D +R+ A
Sbjct: 184 HAPAALVHVISNPVNSTVPIAAEVLKRKGVYDPRKLFGVTTLDVVRANTFVA 235
>09_02_0535 -
10346395-10346705,10347100-10347175,10348931-10349070,
10349294-10349578,10349677-10349718,10350963-10351461,
10351557-10351723,10352128-10352412,10352695-10352836
Length = 648
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 308 PSPSRILGLTGEDTLERALKNSDLIIAAGGLS-QRPDISEKALLTANSQFI 457
P+P+ L G+ L +N+ L+IA GG S PD SE A A+S I
Sbjct: 29 PAPTTFKTLNGKLDLAPLNRNAPLVIAKGGFSGVFPDSSEYAFAFASSLHI 79
>05_01_0517 +
4403644-4403796,4404025-4404307,4404324-4404749,
4404789-4405372,4417315-4417479,4417629-4417694
Length = 558
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -3
Query: 627 CDRMASISVIPNNFFSS*TP*FLIISAV-MGIK*FIGSVTIPTKGIGHDLP 478
CD AS+SV+PN+ F F++++ M ++ SV PT GI D+P
Sbjct: 422 CDLGASVSVMPNDVFDKLN--FMVLAPTPMRLQLANSSVRYPT-GIAEDVP 469
>01_06_1100 + 34530132-34530485,34530544-34530705
Length = 171
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 254 VHDNKEFTPGVTLDLSQIPSPSRILGLTGEDTLERALKNSDLIIAAGGLSQRPDISEKAL 433
+H F P L L I P+ ++ L +ALK++D + G+ R +S K L
Sbjct: 51 IHLKLAFLPYGELPLVAIEGPNAVVVLQDWTNAHQALKDNDGWFKSQGMHLRV-VSAKHL 109
Query: 434 LTANSQFIKSIISKLGR 484
TA+S +K + G+
Sbjct: 110 DTAHSVVLKELKKPTGQ 126
>07_03_1187 +
24667044-24667091,24667196-24667274,24667520-24667695,
24668216-24668766,24669080-24669941
Length = 571
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = -3
Query: 564 FLIISAVMGIK*FIGSVTIPTKGIGHDLPNFEMIDLMNWLFAVNRAFSLISGRCESPPAA 385
F+ VM K IGS++IP L +FE+I + W+F VN+ ++ C + A
Sbjct: 362 FIQQGTVMNTK--IGSLSIPAAS----LYSFEVICVTFWVFLVNKVIIPVTRACFANGAE 415
Query: 384 M 382
M
Sbjct: 416 M 416
>01_04_0119 - 16230375-16231093,16231298-16231378,16231634-16231997
Length = 387
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -3
Query: 627 CDRMASISVIPNNFFSS*TP*FLIISA-VMGIK*FIGSVTIPTKGIGHDLP 478
CD AS+SV+P + F F+++SA +M ++ SV P GI D+P
Sbjct: 228 CDLRASVSVMPKDIFDKLN--FIVLSATLMRLQLADLSVRYPA-GIAEDVP 275
>09_06_0317 - 22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 211 QDLTDFACCANYRNLVTSCCGEQRRDYSSIHYHNAMIRGKTYFE 80
+++ +F A+ ++ + CGE D SI N M + YF+
Sbjct: 965 EEVCEFMVPADESQIICALCGESFDDIYSIEKDNWMYKDAVYFD 1008
>06_03_0588 + 22567820-22570802,22570917-22571269
Length = 1111
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = -3
Query: 630 HCDRMASISVIPNNFFSS*TP*FLIISAVMGIK*FIGSVT--IPTKGIGHDLPNFEMIDL 457
H + +++V NN P IS++ + S+T +P+K IGH LPN + + L
Sbjct: 315 HVPTLQTLAVNLNNLSGPVPPSIFNISSLAYLGMANNSLTGRLPSK-IGHMLPNIQELIL 373
Query: 456 MNWLFAVNRAFSLIS 412
+N F+ + SL++
Sbjct: 374 LNNKFSGSIPVSLLN 388
>03_04_0149 - 17716538-17716597,17718117-17718242
Length = 61
Score = 27.5 bits (58), Expect = 9.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 586 FFIINTVIPHNFSSHGN 536
+FI N ++PHN+ HG+
Sbjct: 30 YFIRNPILPHNYRKHGD 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,743,420
Number of Sequences: 37544
Number of extensions: 259129
Number of successful extensions: 662
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -