Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14f24
         (386 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    23   0.92 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   2.8  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    22   2.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   3.7  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    20   8.6  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    20   8.6  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    20   8.6  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    20   8.6  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    20   8.6  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    20   8.6  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    20   8.6  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    20   8.6  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    20   8.6  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    20   8.6  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    20   8.6  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    20   8.6  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 250 LKTTMFQYQGSDSYNCTHYSKRYYAI 173
           LKT M  + G   Y+C+H  +++  +
Sbjct: 25  LKTHMRLHTGEKPYHCSHCDRQFVQV 50


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 57  KLKNNCF*QIS*SQKCSDCPLEK 125
           K  NNC   +   +KC +C L+K
Sbjct: 224 KYGNNCEIDMYMRRKCQECRLKK 246


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 57  KLKNNCF*QIS*SQKCSDCPLEK 125
           K  NNC   +   +KC +C L+K
Sbjct: 21  KYGNNCEIDMYMRRKCQECRLKK 43


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 100 FCD*LIC*KQLFFNFIYIALENKW 29
           F D L+    + F+ IY  LEN+W
Sbjct: 89  FADCLVGLVVMPFSAIYEVLENRW 112


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 99  NNYNKHNYNKLYYNINYI 116


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -2

Query: 235 FQYQGSDSYNCTHYSKRYY 179
           + Y    +YN  +Y+K+ Y
Sbjct: 98  YNYNNKYNYNNNNYNKKLY 116


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 99  NNYNKHNYNKLYYNINYI 116


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 99  NNYNKHNYNKLYYNINYI 116


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 99  NNYNKHNYNKLYYNINYI 116


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 99  NNYNKHNYNKLYYNINYI 116


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 99  NNYNKHNYNKLYYNINYI 116


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 99  NNYNKHNYNKLYYNINYI 116


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 99  NNYNKHNYNKLYYNINYI 116


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 99  NNYNKHNYNKLYYNINYI 116


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 332 NNYNKHNYNKLYYNINYI 349


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 217 DSYNCTHYSKRYYAIDSV 164
           ++YN  +Y+K YY I+ +
Sbjct: 332 NNYNKHNYNKLYYNINYI 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,753
Number of Sequences: 438
Number of extensions: 1495
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9391092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)