Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14f22
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 58 2e-08
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 58 2e-08
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 58 2e-08
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 58 2e-08
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 58 2e-08
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 58 2e-08
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 58 2e-08
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 36 0.083
X00129-1|CAA24959.1| 199|Homo sapiens protein ( Human mRNA for ... 31 2.4
BC020633-1|AAH20633.1| 201|Homo sapiens retinol binding protein... 31 2.4
AL356214-6|CAH72329.1| 199|Homo sapiens retinol binding protein... 31 2.4
AL356214-5|CAH72328.1| 201|Homo sapiens retinol binding protein... 31 2.4
AF215824-1|AAG43987.1| 754|Homo sapiens a disintegrin and metal... 31 2.4
AF090327-1|AAC36742.1| 588|Homo sapiens sperm maturation-relate... 30 5.5
Z85986-2|CAI19118.1| 348|Homo sapiens potassium channel tetrame... 29 7.2
AY305862-1|AAP74385.1| 419|Homo sapiens K+ channel tetramerizat... 29 7.2
AL136135-1|CAH72192.1| 348|Homo sapiens potassium channel tetra... 29 7.2
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 57.6 bits (133), Expect = 2e-08
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 144 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTSTA---SHCITYNFSRTDEPGQYQLEQDSQ 314
+HLG CP F++N+ LG WY I+K T CI N+S + L Q+
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQE-- 80
Query: 315 HFILGLTPLKHDYKYTGVLTVPDPAVPARMKVRFPLSVAGSASYTVLATDYTTYAAVFTC 494
L + G T + PA+++V+F + SA Y +LATDY YA V++C
Sbjct: 81 -----LRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALVYSC 134
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 57.6 bits (133), Expect = 2e-08
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 144 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTSTA---SHCITYNFSRTDEPGQYQLEQDSQ 314
+HLG CP F++N+ LG WY I+K T CI N+S + L Q+
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQE-- 80
Query: 315 HFILGLTPLKHDYKYTGVLTVPDPAVPARMKVRFPLSVAGSASYTVLATDYTTYAAVFTC 494
L + G T + PA+++V+F + SA Y +LATDY YA V++C
Sbjct: 81 -----LRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALVYSC 134
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 57.6 bits (133), Expect = 2e-08
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 144 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTSTA---SHCITYNFSRTDEPGQYQLEQDSQ 314
+HLG CP F++N+ LG WY I+K T CI N+S + L Q+
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQE-- 80
Query: 315 HFILGLTPLKHDYKYTGVLTVPDPAVPARMKVRFPLSVAGSASYTVLATDYTTYAAVFTC 494
L + G T + PA+++V+F + SA Y +LATDY YA V++C
Sbjct: 81 -----LRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALVYSC 134
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 57.6 bits (133), Expect = 2e-08
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 144 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTSTA---SHCITYNFSRTDEPGQYQLEQDSQ 314
+HLG CP F++N+ LG WY I+K T CI N+S + L Q+
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQE-- 80
Query: 315 HFILGLTPLKHDYKYTGVLTVPDPAVPARMKVRFPLSVAGSASYTVLATDYTTYAAVFTC 494
L + G T + PA+++V+F + SA Y +LATDY YA V++C
Sbjct: 81 -----LRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALVYSC 134
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 57.6 bits (133), Expect = 2e-08
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 144 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTSTA---SHCITYNFSRTDEPGQYQLEQDSQ 314
+HLG CP F++N+ LG WY I+K T CI N+S + L Q+
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQE-- 80
Query: 315 HFILGLTPLKHDYKYTGVLTVPDPAVPARMKVRFPLSVAGSASYTVLATDYTTYAAVFTC 494
L + G T + PA+++V+F + SA Y +LATDY YA V++C
Sbjct: 81 -----LRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALVYSC 134
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 57.6 bits (133), Expect = 2e-08
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 144 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTSTA---SHCITYNFSRTDEPGQYQLEQDSQ 314
+HLG CP F++N+ LG WY I+K T CI N+S + L Q+
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQE-- 80
Query: 315 HFILGLTPLKHDYKYTGVLTVPDPAVPARMKVRFPLSVAGSASYTVLATDYTTYAAVFTC 494
L + G T + PA+++V+F + SA Y +LATDY YA V++C
Sbjct: 81 -----LRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALVYSC 134
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 57.6 bits (133), Expect = 2e-08
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 144 YHLGSCPIVEPMSGFEMNRLLGVWYVIQKTSTA---SHCITYNFSRTDEPGQYQLEQDSQ 314
+HLG CP F++N+ LG WY I+K T CI N+S + L Q+
Sbjct: 23 FHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQE-- 80
Query: 315 HFILGLTPLKHDYKYTGVLTVPDPAVPARMKVRFPLSVAGSASYTVLATDYTTYAAVFTC 494
L + G T + PA+++V+F + SA Y +LATDY YA V++C
Sbjct: 81 -----LRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALVYSC 134
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 35.9 bits (79), Expect = 0.083
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 393 PARMKVRFPLSVAGSASYTVLATDYTTYAAVFTC 494
PA+++V+F + SA Y +LATDY YA V++C
Sbjct: 11 PAKLEVKFSWFMP-SAPYWILATDYENYALVYSC 43
>X00129-1|CAA24959.1| 199|Homo sapiens protein ( Human mRNA for
retinol binding protein (RBP). ).
Length = 199
Score = 31.1 bits (67), Expect = 2.4
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Frame = +3
Query: 186 FEMNRLLGVWYVIQKTSTASHCITYNFSR---TDEPGQYQLEQDSQHFILGLTPLKHDYK 356
F+ R G WY + K + N DE GQ + +L + D
Sbjct: 31 FDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADM- 89
Query: 357 YTGVLTVPDPAVPARMKVRF----PLSVAGSASYTVLATDYTTYAAVFTCXKL 503
V T D PA+ K+++ G+ + ++ TDY TYA ++C L
Sbjct: 90 ---VGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLL 139
>BC020633-1|AAH20633.1| 201|Homo sapiens retinol binding protein 4,
plasma protein.
Length = 201
Score = 31.1 bits (67), Expect = 2.4
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Frame = +3
Query: 186 FEMNRLLGVWYVIQKTSTASHCITYNFSR---TDEPGQYQLEQDSQHFILGLTPLKHDYK 356
F+ R G WY + K + N DE GQ + +L + D
Sbjct: 33 FDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADM- 91
Query: 357 YTGVLTVPDPAVPARMKVRF----PLSVAGSASYTVLATDYTTYAAVFTCXKL 503
V T D PA+ K+++ G+ + ++ TDY TYA ++C L
Sbjct: 92 ---VGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLL 141
>AL356214-6|CAH72329.1| 199|Homo sapiens retinol binding protein 4,
plasma protein.
Length = 199
Score = 31.1 bits (67), Expect = 2.4
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Frame = +3
Query: 186 FEMNRLLGVWYVIQKTSTASHCITYNFSR---TDEPGQYQLEQDSQHFILGLTPLKHDYK 356
F+ R G WY + K + N DE GQ + +L + D
Sbjct: 31 FDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADM- 89
Query: 357 YTGVLTVPDPAVPARMKVRF----PLSVAGSASYTVLATDYTTYAAVFTCXKL 503
V T D PA+ K+++ G+ + ++ TDY TYA ++C L
Sbjct: 90 ---VGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLL 139
>AL356214-5|CAH72328.1| 201|Homo sapiens retinol binding protein 4,
plasma protein.
Length = 201
Score = 31.1 bits (67), Expect = 2.4
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Frame = +3
Query: 186 FEMNRLLGVWYVIQKTSTASHCITYNFSR---TDEPGQYQLEQDSQHFILGLTPLKHDYK 356
F+ R G WY + K + N DE GQ + +L + D
Sbjct: 33 FDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADM- 91
Query: 357 YTGVLTVPDPAVPARMKVRF----PLSVAGSASYTVLATDYTTYAAVFTCXKL 503
V T D PA+ K+++ G+ + ++ TDY TYA ++C L
Sbjct: 92 ---VGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLL 141
>AF215824-1|AAG43987.1| 754|Homo sapiens a disintegrin and
metalloproteinase 7 protein.
Length = 754
Score = 31.1 bits (67), Expect = 2.4
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 165 IVEPMSGFEMNRLLGVWYVIQKTSTASH-CITYNFSRTDEPGQYQLEQDSQHFILGLTPL 341
++EP+ + L Y ++ A++ C NF+R PG + E+DS+ I G+
Sbjct: 141 LIEPVKYSDEGEHLVFKYNLRVPYGANYSCTELNFTRKTVPGDNESEEDSK--IKGI--- 195
Query: 342 KHDYKYTGVLTVPDPAVPAR 401
HD KY + V D V R
Sbjct: 196 -HDEKYVELFIVADDTVYRR 214
>AF090327-1|AAC36742.1| 588|Homo sapiens sperm maturation-related
glycoprotein GP-83 protein.
Length = 588
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 249 CITYNFSRTDEPGQYQLEQDSQHFILGLTPLKHDYKYTGVLTVPDPAVPAR 401
C NF+R PG + E+DS+ I G+ HD KY + V D V R
Sbjct: 4 CTELNFTRKTVPGDNESEEDSK--IKGI----HDEKYVELFIVADDTVYRR 48
>Z85986-2|CAI19118.1| 348|Homo sapiens potassium channel
tetramerisation domain containing 20 protein.
Length = 348
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 258 YNFSRTDEPGQYQLEQDSQHFILGLTPLKHDYKYTGVLTVPD 383
YNF+R +E G+Y++ + + T L DY TG++ PD
Sbjct: 82 YNFTRPNEKGEYEIAEGISATVF-RTVL--DYYKTGIINCPD 120
>AY305862-1|AAP74385.1| 419|Homo sapiens K+ channel tetramerization
protein protein.
Length = 419
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 258 YNFSRTDEPGQYQLEQDSQHFILGLTPLKHDYKYTGVLTVPD 383
YNF+R +E G+Y++ + + T L DY TG++ PD
Sbjct: 153 YNFTRPNEKGEYEIAEGISATVF-RTVL--DYYKTGIINCPD 191
>AL136135-1|CAH72192.1| 348|Homo sapiens potassium channel
tetramerisation domain containing 20 protein.
Length = 348
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 258 YNFSRTDEPGQYQLEQDSQHFILGLTPLKHDYKYTGVLTVPD 383
YNF+R +E G+Y++ + + T L DY TG++ PD
Sbjct: 82 YNFTRPNEKGEYEIAEGISATVF-RTVL--DYYKTGIINCPD 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,722,610
Number of Sequences: 237096
Number of extensions: 1522816
Number of successful extensions: 2874
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2867
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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