Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14f22
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99283-4|CAB16534.1| 342|Caenorhabditis elegans Hypothetical pr... 28 3.4
U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical p... 28 3.4
Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 27 6.0
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 27 6.0
Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF000298-6|AAC48262.1| 340|Caenorhabditis elegans Seven tm rece... 27 7.9
>Z99283-4|CAB16534.1| 342|Caenorhabditis elegans Hypothetical
protein Y70C5C.6a protein.
Length = 342
Score = 28.3 bits (60), Expect = 3.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 419 RESNLHPCRNSGVRYCQDTSI 357
R+SN HPCR+ +R C + +
Sbjct: 44 RQSNAHPCRSCRIRKCYEAGM 64
>U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical
protein F08F8.10a protein.
Length = 487
Score = 28.3 bits (60), Expect = 3.4
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +3
Query: 222 IQKTSTASHCITYNFSRTDEPGQYQLEQDSQHFILGLTPLKHDYKYTGVLTVPDPAVPAR 401
+QK T + D+ G+ Q + + LT +H Y+Y G + D AR
Sbjct: 110 LQKVKRKKGATTEESTDIDQGGEEQYYDEDEEIEFNLTGEQHKYQYLGYDRMNDN--KAR 167
Query: 402 MKVRFPLSVAGSASYTVLATD-YTTY 476
K +S G T+ ++ Y TY
Sbjct: 168 KKAAKLISYPGYTGSTLNTSNVYQTY 193
>Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical
protein ZC434.3 protein.
Length = 474
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 348 DYKYTGVLTVPDPAVPARMKVRFPLSVAGSASYTVLATDY 467
DY + G P P P+ + VRFP+S A + L Y
Sbjct: 192 DYLFDGGFDFPIPLAPSGVGVRFPMSGAVNVGTDPLLITY 231
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 395 CKDEGSIPSERCRLSKLHSFGNGLHNIRRGL 487
CK G ERCRL + G GL N+ L
Sbjct: 1318 CKYHGEDTDERCRLRSVSFDGEGLLNVNLDL 1348
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 395 CKDEGSIPSERCRLSKLHSFGNGLHNIRRGL 487
CK G ERCRL + G GL N+ L
Sbjct: 1318 CKYHGEDTDERCRLRSVSFDGEGLLNVNLDL 1348
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 395 CKDEGSIPSERCRLSKLHSFGNGLHNIRRGL 487
CK G ERCRL + G GL N+ L
Sbjct: 1318 CKYHGEDTDERCRLRSVSFDGEGLLNVNLDL 1348
>Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical
protein Y57G11A.1a protein.
Length = 598
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 479 GVCCVVRCQNCVAC*AGNAQRESNLHPCRNSGVRYCQ 369
G+ V C C+ C A R H C+ SG YC+
Sbjct: 525 GLLYHVNCFRCIDC--KQALRVEKAHRCQQSGDLYCR 559
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 167 NGT*S*VISVTVNIGNSQKHS*YRQLPHFVTIFASYVVLRNMR*HDCR 24
NGT + V NI S KH ++ +FV F S+++ R++ D R
Sbjct: 186 NGTLHRRLIVATNILRSGKHERMSEVLNFVDEFMSFIIGRHVNCSDVR 233
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 167 NGT*S*VISVTVNIGNSQKHS*YRQLPHFVTIFASYVVLRNMR*HDCR 24
NGT + V NI S KH ++ +FV F S+++ R++ D R
Sbjct: 186 NGTLHRRLIVATNILRSGKHERMSEVLNFVDEFMSFIIGRHVNCSDVR 233
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 167 NGT*S*VISVTVNIGNSQKHS*YRQLPHFVTIFASYVVLRNMR*HDCR 24
NGT + V NI S KH ++ +FV F S+++ R++ D R
Sbjct: 186 NGTLHRRLIVATNILRSGKHERMSEVLNFVDEFMSFIIGRHVNCSDVR 233
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 167 NGT*S*VISVTVNIGNSQKHS*YRQLPHFVTIFASYVVLRNMR*HDCR 24
NGT + V NI S KH ++ +FV F S+++ R++ D R
Sbjct: 186 NGTLHRRLIVATNILRSGKHERMSEVLNFVDEFMSFIIGRHVNCSDVR 233
>AF000298-6|AAC48262.1| 340|Caenorhabditis elegans Seven tm
receptor protein 122 protein.
Length = 340
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 81 KMWKLTVLGVFLTVTYVYSHTYHLG 155
KMWK+ V+ + +T+ + H Y G
Sbjct: 129 KMWKIYVIPIIITILWYLVHGYFCG 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,164,788
Number of Sequences: 27780
Number of extensions: 230880
Number of successful extensions: 629
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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