Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14f18
         (677 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0182 - 11552540-11552606,11552692-11552787,11553458-115535...   210   1e-54
03_05_0833 - 28045442-28045881,28045961-28046063,28046172-280462...    32   0.49 
11_06_0256 - 21727919-21728366,21728463-21728512                       31   1.1  
08_01_0213 - 1703682-1703696,1703824-1703919,1704033-1704104,170...    30   2.0  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   4.5  
03_05_0832 - 28037047-28037315,28037428-28037530,28037664-280376...    28   7.9  

>10_06_0182 -
           11552540-11552606,11552692-11552787,11553458-11553528,
           11553660-11553764,11554149-11554239,11554331-11554381,
           11554478-11554566,11554667-11554909,11555027-11555190,
           11555883-11555988,11556075-11556242,11557456-11557494,
           11557582-11557713
          Length = 473

 Score =  210 bits (512), Expect = 1e-54
 Identities = 99/186 (53%), Positives = 127/186 (68%)
 Frame = +2

Query: 74  LEKHLVSKEPFGQFKSWFEEACARKEILEPNAMCLATVSQEGFPSARFVLCKGYGKEGFK 253
           L ++ V  +PF QF  WF+EA     + EPNAM L T  +EG PS+R VL KG  K+GF 
Sbjct: 272 LLENQVMPDPFDQFVRWFDEAVTAG-LREPNAMALTTADKEGKPSSRMVLLKGVDKQGFV 330

Query: 254 FYTNYGSKKAKDIEGNPNVAATFYWEILNRSVRIEGRVEKLSEDDSTKYFHTRPVVSQIA 433
           +YTNYGS+KA D+  NPN A  FYW  +NR VR+EG V+K+ E++S KYFH+RP  SQ+ 
Sbjct: 331 WYTNYGSQKAHDLSENPNAALLFYWNEMNRQVRVEGSVQKVPEEESEKYFHSRPRGSQLG 390

Query: 434 ACASYQSTPIESRDVLCEREKLLEQQYMIPGKEVPKPSYWGGYLLIPRSVEFWQGQRDRL 613
           A  S QST I  R+VL +  K LEQ+Y   G  +PKP YWGGY L P+  EFWQGQ+ RL
Sbjct: 391 AIVSKQSTIIPGREVLQQAYKELEQKYS-DGSVIPKPDYWGGYRLTPKLFEFWQGQQSRL 449

Query: 614 HDRIKF 631
           HDR+++
Sbjct: 450 HDRLQY 455


>03_05_0833 -
           28045442-28045881,28045961-28046063,28046172-28046203,
           28046299-28046516,28046606-28046721,28047757-28048000,
           28048423-28048510,28048596-28048667,28048758-28048869,
           28049047-28049115,28049627-28049685,28050067-28050325
          Length = 603

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 242 EGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNRSVRIEGRVEK 373
           E  +FY NY ++  K I+   NV A F W +L+    + G   K
Sbjct: 475 ERIEFYKNYLTELKKAIDDGANVVAYFAWSLLDNFEWLSGYTSK 518


>11_06_0256 - 21727919-21728366,21728463-21728512
          Length = 165

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 289 IFSLFTSIVCVKFESFFTITLAQNKPS*WKTFL 191
           I+S+ + +V  K E ++ I L  NKP  WK+ L
Sbjct: 7   IYSIGSQVVSRKAEKYYLIFLTLNKPKKWKSLL 39


>08_01_0213 -
           1703682-1703696,1703824-1703919,1704033-1704104,
           1704372-1704444,1704508-1704710,1705058-1706330,
           1706800-1706868,1706940-1707088,1707275-1707487,
           1708385-1708669
          Length = 815

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 272 SKKAKDIEGNPNVAATFYWEILNRSVRIEGRVEKLS 379
           +K+A+ IE +PN A   +W  +N   RIE  ++ ++
Sbjct: 91  AKQAQVIEKDPNKAVPLFWAAINSGDRIESALKDMA 126


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 151 NSGAQCNVSSYSFTGRFSISSVC 219
           +SG  CNV   S TGRFS   +C
Sbjct: 282 SSGETCNVGENSITGRFSQEILC 304


>03_05_0832 -
           28037047-28037315,28037428-28037530,28037664-28037695,
           28037788-28038005,28038145-28038260,28038514-28038757,
           28039129-28039216,28039513-28039588,28040126-28040164,
           28040347-28040405,28041292-28041529
          Length = 493

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 254 FYTNYGSKKAKDIEGNPNVAATFYWEILNRSVRIEGRVEK 373
           FY +Y ++  K I+   NVA  F W +L+    + G   K
Sbjct: 426 FYRSYLTQLKKAIDEGANVAGYFAWSLLDNFEWLSGYTSK 465


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,130,076
Number of Sequences: 37544
Number of extensions: 352294
Number of successful extensions: 844
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)