BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14f18
(677 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 24 3.8
AF185641-1|AAF15576.1| 116|Anopheles gambiae Toll protein. 24 3.8
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 24 5.1
AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long fo... 24 5.1
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 8.9
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 24.2 bits (50), Expect = 3.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 44 IKYKEKDETFLEKHLV 91
+ Y KDE F+ +HLV
Sbjct: 901 VSYSHKDEAFITEHLV 916
>AF185641-1|AAF15576.1| 116|Anopheles gambiae Toll protein.
Length = 116
Score = 24.2 bits (50), Expect = 3.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 44 IKYKEKDETFLEKHLV 91
+ Y KDE F+ +HLV
Sbjct: 2 VSYSHKDEAFITEHLV 17
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 23.8 bits (49), Expect = 5.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 575 LELRDILPSSLVSELLYQVSYIAVQEAFLFHTEHLWTLL 459
+E D + +SLV Y+ YIA Q E W +L
Sbjct: 1013 VEGSDYINASLVDGYRYRKRYIAAQGPLQETAEDFWRML 1051
>AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long form
protein.
Length = 311
Score = 23.8 bits (49), Expect = 5.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 457 STLVACTCSNLADYWSCM 404
S L +CT ++ DY+SC+
Sbjct: 247 SVLASCTGTHAYDYYSCL 264
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.0 bits (47), Expect = 8.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 386 DSTKYFHTRPVVSQIAACASYQSTPIESRDVLCE 487
+ST+ F PV+S+ A + ++ S+ VLCE
Sbjct: 78 NSTEAFICTPVLSRQRATRAPTTSTWTSKSVLCE 111
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,033
Number of Sequences: 2352
Number of extensions: 14938
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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