Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14f18
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13876-17|AAA21167.1|  253|Caenorhabditis elegans Hypothetical p...   174   6e-44
U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase prote...    30   1.3  
AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase pro...    30   1.3  
Z81517-7|CAE11306.1|  329|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AC006807-4|AAK84618.1|  904|Caenorhabditis elegans Hypothetical ...    29   4.0  
AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AL110500-6|CAB60429.1|  629|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z83120-9|CAB05589.2|  773|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z81515-11|CAB04199.2|  773|Caenorhabditis elegans Hypothetical p...    28   7.0  
AF011893-1|AAC27124.1|  773|Caenorhabditis elegans maternal-effe...    28   7.0  

>U13876-17|AAA21167.1|  253|Caenorhabditis elegans Hypothetical
           protein F57B9.1 protein.
          Length = 253

 Score =  174 bits (423), Expect = 6e-44
 Identities = 89/204 (43%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
 Frame = +2

Query: 38  MRIKY-KEKDETFLEKHLVSKEPFGQFKSWFEEACARKEIL--EPNAMCLATVSQEGFPS 208
           +R KY    D   LE  L +  PF  F  WF    ++ ++   E NA+ L+TV ++  PS
Sbjct: 38  IRAKYLNSHDPYLLESKLPTTSPFELFDIWFRNVASQSDLTFEEINAVSLSTVGKDLRPS 97

Query: 209 ARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNRSVRIEGRVEKLSEDD 388
           +R VL K Y   GF FYTNY S+K   +E NPN A  FYW  +NR +R+EG VEKL ++ 
Sbjct: 98  SRMVLLKAYTPTGFSFYTNYTSRKGNQLEENPNAAMLFYWPKVNRQIRVEGVVEKLPDEM 157

Query: 389 STKYFHTRPVVSQIAACASYQSTPIESRDVLCEREKLLEQQYMIPGKE-VPKPSYWGGYL 565
           +  Y+++RPV S+I + +S QS  +  R+ L  ++  L +  +  G + + KP  WGGY 
Sbjct: 158 AVAYWNSRPVASRIGSKSSDQSKVVPDREFLESKKVALTELSVREGAQAITKPESWGGYH 217

Query: 566 LIPRSVEFWQGQRDRLHDRIKFRR 637
           LIPR  EFWQGQ DRLHDRI F R
Sbjct: 218 LIPRYFEFWQGQSDRLHDRIVFER 241


>U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase protein
           2 protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 383 DDSTKYFHTR-PVVSQIAACASYQSTPIESRDVLCEREKLLEQQYMIPG 526
           D S+++F    P   Q+A+  + Q  P++   ++C   K L + Y + G
Sbjct: 292 DFSSRFFAVHGPYAGQLASTRTSQLIPVDLNSIICGNMKTLSEMYTVCG 340


>AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase
           protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 383 DDSTKYFHTR-PVVSQIAACASYQSTPIESRDVLCEREKLLEQQYMIPG 526
           D S+++F    P   Q+A+  + Q  P++   ++C   K L + Y + G
Sbjct: 292 DFSSRFFAVHGPYAGQLASTRTSQLIPVDLNSIICGNMKTLSEMYTVCG 340


>Z81517-7|CAE11306.1|  329|Caenorhabditis elegans Hypothetical
           protein F28B1.8 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = -1

Query: 383 LLKVFLLCPQFSLIYSVFPNKMWQQR*DSLLYL*PFYFHSLCKI*ILLY 237
           ++ + LLCP   +I+SVF N  + Q  ++ +++  F FH +    ILL+
Sbjct: 243 VVMIALLCPATYVIFSVF-NDYYNQAANNCMFI-SFAFHGIFSTLILLW 289


>AC006807-4|AAK84618.1|  904|Caenorhabditis elegans Hypothetical
           protein Y58A7A.4 protein.
          Length = 904

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 522 LVKKFRNQATGEDIS*FQGLSNSGKVRGTGFMIASNSEDPIK-EKCLMKDYY 674
           +VKK  N  T      F G  N  K     F+I S+SE  IK  +CL  ++Y
Sbjct: 520 MVKKENNLVTCYSSDDFCGFCNRKKKSFELFLIKSSSETKIKCTECLRNEFY 571


>AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical
           protein Y58A7A.3 protein.
          Length = 883

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 522 LVKKFRNQATGEDIS*FQGLSNSGKVRGTGFMIASNSEDPIK-EKCLMKDYY 674
           +VKK  N  T      F G  N  K     F+I S+SE  IK  +CL  ++Y
Sbjct: 501 MVKKENNLVTCYSSDDFCGFCNRKKKSFELFLIKSSSETKIKCTECLRNEFY 552


>Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical
           protein K09C8.4 protein.
          Length = 633

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +2

Query: 326 WEIL-NRSVRIEGRVEKLSEDDSTKYFHTRPV-VSQIAACASYQSTPIESRDVLCEREKL 499
           W ++ N+ +RI G+     +D    Y H  P  + QI    +YQ   +     LC    L
Sbjct: 207 WRVVANKYLRIHGKTAMSDQDIFNAYIHDYPTEIIQIPCAYNYQLGALTKSKELCPETPL 266


>AL110500-6|CAB60429.1|  629|Caenorhabditis elegans Hypothetical
           protein Y87G2A.6 protein.
          Length = 629

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 21/89 (23%), Positives = 37/89 (41%)
 Frame = +2

Query: 155 LEPNAMCLATVSQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEI 334
           LE  A    T++++  P    V C    K  F  +TN      +D EGNP+V+     ++
Sbjct: 394 LETAAADNPTLNRKTDPDPLMVCC-ALRKNRFYLFTNTEPYNVEDDEGNPSVSGR---DV 449

Query: 335 LNRSVRIEGRVEKLSEDDSTKYFHTRPVV 421
            N   + E  +  L  +   K  +   ++
Sbjct: 450 FNERPKKEDLLTALDTEGGEKVLNKEAII 478


>Z83120-9|CAB05589.2|  773|Caenorhabditis elegans Hypothetical
           protein R06A4.7 protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +2

Query: 188 SQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNRSVRIEG 361
           SQ  F SA  VLC+ + ++GF   +    KK K  EG  N+     +  L  +  I G
Sbjct: 264 SQREFSSAFPVLCENFAEKGFDPSSLEPWKKTKIAEGAQNLRNPTCYACLAYTCAIHG 321


>Z81515-11|CAB04199.2|  773|Caenorhabditis elegans Hypothetical
           protein R06A4.7 protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +2

Query: 188 SQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNRSVRIEG 361
           SQ  F SA  VLC+ + ++GF   +    KK K  EG  N+     +  L  +  I G
Sbjct: 264 SQREFSSAFPVLCENFAEKGFDPSSLEPWKKTKIAEGAQNLRNPTCYACLAYTCAIHG 321


>AF011893-1|AAC27124.1|  773|Caenorhabditis elegans maternal-effect
           sterile 2 protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +2

Query: 188 SQEGFPSARFVLCKGYGKEGFKFYTNYGSKKAKDIEGNPNVAATFYWEILNRSVRIEG 361
           SQ  F SA  VLC+ + ++GF   +    KK K  EG  N+     +  L  +  I G
Sbjct: 264 SQREFSSAFPVLCENFAEKGFDPSSLEPWKKTKIAEGAQNLRNPTCYACLAYTCAIHG 321


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,460,135
Number of Sequences: 27780
Number of extensions: 334340
Number of successful extensions: 884
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)