Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14f08
(527 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC094839-1|AAH94839.1| 352|Homo sapiens ADP-ribosylation-like f... 102 7e-22
BC015909-1|AAH15909.2| 360|Homo sapiens ADP-ribosylation-like f... 102 7e-22
BC001958-1|AAH01958.1| 218|Homo sapiens ARL6IP4 protein protein. 102 7e-22
AB035384-1|BAA94744.1| 218|Homo sapiens SRp25 nuclear protein p... 102 7e-22
BC015569-1|AAH15569.1| 215|Homo sapiens ARL6IP4 protein protein. 92 1e-18
AK074098-1|BAB84924.1| 432|Homo sapiens FLJ00169 protein protein. 92 1e-18
DQ099385-1|AAZ13761.1| 181|Homo sapiens ADP-ribosylation-like f... 86 6e-17
U58994-1|AAD10849.1| 407|Homo sapiens ladinin protein. 35 0.15
U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein. 35 0.15
BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein. 35 0.15
BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein. 35 0.15
BC034394-1|AAH34394.1| 322|Homo sapiens hypothetical protein MG... 33 0.47
M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box p... 32 1.1
BC005116-1|AAH05116.1| 709|Homo sapiens structure specific reco... 32 1.1
BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein. 31 2.5
>BC094839-1|AAH94839.1| 352|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 352
Score = 102 bits (245), Expect = 7e-22
Identities = 47/64 (73%), Positives = 56/64 (87%)
Frame = +3
Query: 336 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 515
+AM PMTKEEW+ +QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D
Sbjct: 282 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 341
Query: 516 ALFQ 527
FQ
Sbjct: 342 LAFQ 345
>BC015909-1|AAH15909.2| 360|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 360
Score = 102 bits (245), Expect = 7e-22
Identities = 47/64 (73%), Positives = 56/64 (87%)
Frame = +3
Query: 336 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 515
+AM PMTKEEW+ +QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D
Sbjct: 290 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 349
Query: 516 ALFQ 527
FQ
Sbjct: 350 LAFQ 353
>BC001958-1|AAH01958.1| 218|Homo sapiens ARL6IP4 protein protein.
Length = 218
Score = 102 bits (245), Expect = 7e-22
Identities = 47/64 (73%), Positives = 56/64 (87%)
Frame = +3
Query: 336 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 515
+AM PMTKEEW+ +QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D
Sbjct: 148 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 207
Query: 516 ALFQ 527
FQ
Sbjct: 208 LAFQ 211
>AB035384-1|BAA94744.1| 218|Homo sapiens SRp25 nuclear protein
protein.
Length = 218
Score = 102 bits (245), Expect = 7e-22
Identities = 47/64 (73%), Positives = 56/64 (87%)
Frame = +3
Query: 336 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 515
+AM PMTKEEW+ +QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D
Sbjct: 148 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 207
Query: 516 ALFQ 527
FQ
Sbjct: 208 LAFQ 211
>BC015569-1|AAH15569.1| 215|Homo sapiens ARL6IP4 protein protein.
Length = 215
Score = 91.9 bits (218), Expect = 1e-18
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = +3
Query: 336 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINR 494
+AM PMTKEEW+ +QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+
Sbjct: 148 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINK 200
>AK074098-1|BAB84924.1| 432|Homo sapiens FLJ00169 protein protein.
Length = 432
Score = 91.9 bits (218), Expect = 1e-18
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = +3
Query: 336 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINR 494
+AM PMTKEEW+ +QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+
Sbjct: 365 QAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINK 417
>DQ099385-1|AAZ13761.1| 181|Homo sapiens ADP-ribosylation-like
factor 6 interacting protein 4 protein.
Length = 181
Score = 86.2 bits (204), Expect = 6e-17
Identities = 42/64 (65%), Positives = 51/64 (79%)
Frame = +3
Query: 336 KAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQATQADG 515
K + KE+ E +QSIIR+V+D ETGR RLIKGDGEVLEEIV+KERH+EIN+QAT+ D
Sbjct: 111 KKLKKKGKEKAEAQQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDC 170
Query: 516 ALFQ 527
FQ
Sbjct: 171 LAFQ 174
>U58994-1|AAD10849.1| 407|Homo sapiens ladinin protein.
Length = 407
Score = 35.1 bits (77), Expect = 0.15
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 270 SQSRDKSPEVSADIP-VELMEISKAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGE 446
SQ+ D+ S +P VE E+ K + P +K+E E QSI+R + R +
Sbjct: 49 SQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILRTRQERRQRRQVVEAAQAP 108
Query: 447 VLEEIVSKERHKEINR-QATQ 506
+ E + ++E ++ QATQ
Sbjct: 109 IQERLEAEEGRNSLSPVQATQ 129
>U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein.
Length = 517
Score = 35.1 bits (77), Expect = 0.15
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 270 SQSRDKSPEVSADIP-VELMEISKAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGE 446
SQ+ D+ S +P VE E+ K + P +K+E E QSI+R + R +
Sbjct: 49 SQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILRTRQERRQRRQVVEAAQAP 108
Query: 447 VLEEIVSKERHKEINR-QATQ 506
+ E + ++E ++ QATQ
Sbjct: 109 IQERLEAEEGRNSLSPVQATQ 129
>BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 35.1 bits (77), Expect = 0.15
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 270 SQSRDKSPEVSADIP-VELMEISKAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGE 446
SQ+ D+ S +P VE E+ K + P +K+E E QSI+R + R +
Sbjct: 49 SQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILRTRQERRQRRQVVEAAQAP 108
Query: 447 VLEEIVSKERHKEINR-QATQ 506
+ E + ++E ++ QATQ
Sbjct: 109 IQERLEAEEGRNSLSPVQATQ 129
>BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 35.1 bits (77), Expect = 0.15
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 270 SQSRDKSPEVSADIP-VELMEISKAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGE 446
SQ+ D+ S +P VE E+ K + P +K+E E QSI+R + R +
Sbjct: 49 SQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILRTRQERRQRRQVVEAAQAP 108
Query: 447 VLEEIVSKERHKEINR-QATQ 506
+ E + ++E ++ QATQ
Sbjct: 109 IQERLEAEEGRNSLSPVQATQ 129
>BC034394-1|AAH34394.1| 322|Homo sapiens hypothetical protein
MGC34821 protein.
Length = 322
Score = 33.5 bits (73), Expect = 0.47
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -2
Query: 517 APSACVACLLISLC-LSLDTISSRTSPSPLINLYLPVSSSNTLLIILCFFSHSSFVIGAM 341
AP+ V C+L L S TI T L LP S S T++++LC +S ++G +
Sbjct: 193 APTFLVYCILRFLAGFSTMTILGNTFILSL-EWTLPRSRSMTIMVLLCSYSVGQMLLGGL 251
Query: 340 AFEI 329
AF I
Sbjct: 252 AFAI 255
>M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box
protein.
Length = 709
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 PEVS-ADIPVELMEISKAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVS 467
P +S D+ + EI K M+ KEEW++K RR ++ Y +G+ ++
Sbjct: 570 PGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEGGRGESSKRDKSKK 629
Query: 468 KERHK-EINRQATQADGA 518
K++ K ++ +++T + G+
Sbjct: 630 KKKVKVKMEKKSTPSRGS 647
>BC005116-1|AAH05116.1| 709|Homo sapiens structure specific
recognition protein 1 protein.
Length = 709
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 PEVS-ADIPVELMEISKAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVS 467
P +S D+ + EI K M+ KEEW++K RR ++ Y +G+ ++
Sbjct: 570 PGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEGGRGESSKRDKSKK 629
Query: 468 KERHK-EINRQATQADGA 518
K++ K ++ +++T + G+
Sbjct: 630 KKKVKVKMEKKSTPSRGS 647
>BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein.
Length = 633
Score = 31.1 bits (67), Expect = 2.5
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 291 PEVS-ADIPVELMEISKAMAPMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVS 467
P +S D+ + EI K M+ KEEW++K RR ++ Y G GE + S
Sbjct: 570 PGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE--GGRGESSKRDKS 627
Query: 468 KERHKE 485
K++ K+
Sbjct: 628 KKKKKK 633
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,074,686
Number of Sequences: 237096
Number of extensions: 950238
Number of successful extensions: 2571
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2571
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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