Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14f08
         (527 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical p...    31   0.39 
AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical...    30   1.2  
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AF077542-2|AAC26294.1|  244|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z80223-4|CAB02318.1|  229|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z35595-6|CAA84637.1|  682|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U61953-17|AAK82912.1|  278|Caenorhabditis elegans Hypothetical p...    27   8.3  
AF292053-1|AAG41149.1|  278|Caenorhabditis elegans 4F223 protein.      27   8.3  

>Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical
           protein R11D1.10a protein.
          Length = 394

 Score = 31.5 bits (68), Expect = 0.39
 Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
 Frame = +3

Query: 273 QSRDKSPEVSADIPVELMEISKAMAPMTKEE-------WEKKQSIIRRVLDEETGRYRLI 431
           +S  K P ++A+ P ELM +++  A + K+E       W++ ++  R++ ++E  + R  
Sbjct: 182 KSSSKEPAMNANNPSELMRVAEDRARIEKKEEEMEHKDWDELEARRRKIFEDEKEKNR-- 239

Query: 432 KGDGEVLEEIVS 467
           + D  + E +VS
Sbjct: 240 EDDASIRESMVS 251


>AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical
           protein K07H8.10 protein.
          Length = 798

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +3

Query: 348 PMTKEEWEKKQSIIRRVLDEETGRYRLIKGDGEVLEEIVSKERHKEINRQA 500
           P  K +  +KQ  ++R LDE T   + +K DG   + I+S+E  +  +R +
Sbjct: 505 PAVKPKVTEKQGGVKRKLDEPTVASKQVKSDG---KSIISEEERRRQDRDS 552


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 412 VSSSNTLLIILCFFSHSSFVIGAMAFEIS 326
           + +S   +IILC F  S F I  M F+IS
Sbjct: 626 IRNSKKTVIILCHFRFSKFYIYKMVFDIS 654


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 412 VSSSNTLLIILCFFSHSSFVIGAMAFEIS 326
           + +S   +IILC F  S F I  M F+IS
Sbjct: 626 IRNSKKTVIILCHFRFSKFYIYKMVFDIS 654


>AF077542-2|AAC26294.1|  244|Caenorhabditis elegans Hypothetical
           protein Y57G7A.5 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +3

Query: 306 DIPVELMEISKAMAPMTKEEWEKKQSIIRRVLDEETG-RYRLIKGDGEVLEEIVSKERHK 482
           +I  +L+E  + M    KE+ EK   +   VLDE+T  R RL +  G+ L    SK   +
Sbjct: 21  EIQTKLIEDLQEMVVKDKEKHEKLLKLGEHVLDEQTRLRTRLSEEFGDFLNR--SK---R 75

Query: 483 EINRQATQADGALF 524
            + R    ADG ++
Sbjct: 76  SLTRNFETADGNVY 89


>Z80223-4|CAB02318.1|  229|Caenorhabditis elegans Hypothetical
           protein F26D10.11 protein.
          Length = 229

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = -2

Query: 505 CVACLLISLCLS----LDTISSRTSPSPLINLYLPVSSSNTLLIILCFFSHS 362
           C+ CL  +L L     +  +SS T P+ + N   PV     + +   F+SHS
Sbjct: 172 CLCCLGFALALKKPPKIPELSSLTGPTVISNTIQPVPRPRKMSLQDSFYSHS 223


>Z35595-6|CAA84637.1|  682|Caenorhabditis elegans Hypothetical
           protein C01G6.6a protein.
          Length = 682

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +3

Query: 294 EVSADIPVELMEISKAMAPMTKEEWEKKQSIIRRVLDEET---GRYRLI 431
           ++SAD    + E S       K E EKK  + +R+ DEE+   GR R+I
Sbjct: 155 DISADKMNAITESSNLKLNQVKTEEEKKALLQKRIEDEESDDEGRGRVI 203


>U61953-17|AAK82912.1|  278|Caenorhabditis elegans Hypothetical
           protein R08C7.12 protein.
          Length = 278

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 472 SLDTISSRTSPSPLINLYLPVSS 404
           S+D+ SSR  PSP+ N   P SS
Sbjct: 4   SIDSSSSRMLPSPITNFVTPSSS 26


>AF292053-1|AAG41149.1|  278|Caenorhabditis elegans 4F223 protein.
          Length = 278

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 472 SLDTISSRTSPSPLINLYLPVSS 404
           S+D+ SSR  PSP+ N   P SS
Sbjct: 4   SIDSSSSRMLPSPITNFVTPSSS 26


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,780,633
Number of Sequences: 27780
Number of extensions: 157592
Number of successful extensions: 609
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)