Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14f07
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 32 0.30
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 32 0.30
U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical pr... 30 1.2
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 30 1.6
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 28 6.5
U23168-9|AAC38805.1| 196|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical ... 27 8.6
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 122 bits (295), Expect = 2e-28
Identities = 56/116 (48%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Frame = +2
Query: 278 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESG--VEFTSGITFNQESGKVFGSLS 451
MAPP +ADLGK A D+F+KGY+FG K+D T++ VEF S + N SGK+ G+L
Sbjct: 1 MAPPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLD 60
Query: 452 SKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLK 619
K+ + YG+T TEKWNT+N L T I + ++ GLKVTL+ +AP G ++GK+K
Sbjct: 61 VKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVK 116
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
T08A11.1 protein.
Length = 1872
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 371 TKSESGVEFTSGITFNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 526
T+S G + +S G+ S K+ V +G T EKWN D + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 371 TKSESGVEFTSGITFNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 526
T+S G + +S G+ S K+ V +G T EKWN D + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094
>U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical
protein F44A2.3 protein.
Length = 574
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 20 KIMLNFDDILIFFNINQLRKLYDRLPFVDAAVTQETIS 133
KI L+ +D++ FFNI +L + L +DAA T S
Sbjct: 285 KISLSREDVINFFNIERLSHILIDLTLLDAASTSSDFS 322
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/77 (20%), Positives = 35/77 (45%)
Frame = +2
Query: 17 LKIMLNFDDILIFFNINQLRKLYDRLPFVDAAVTQETISCLRPDGTIGQMIICKDEDGEI 196
LK +LNF ++ + N L + R ++ CL+ + + + D E+
Sbjct: 280 LKYLLNFGEVSQYVGYNALSDFFPRDSIKPNPYCDDS-HCLQRQKEYEEKVANQPVDLEV 338
Query: 197 QCPNNETIQSQENKFSL 247
+ P ET+ ++N++ +
Sbjct: 339 EVPEEETVVHEDNEWGI 355
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 434 VFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 529
VFG LSS DYG+T K+ TD I
Sbjct: 252 VFGELSSSKKTIDYGITKQWKYRTDGRFELSI 283
>U23168-9|AAC38805.1| 196|Caenorhabditis elegans Hypothetical
protein B0228.1 protein.
Length = 196
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 302 LGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITF 415
L K D+F K YH +FKLD + V T+ TF
Sbjct: 159 LTPKEYDIFRKHYHPHIFKLDNIGNNTEAVRTTTHETF 196
>Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical
protein K09C8.4 protein.
Length = 633
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +2
Query: 227 QENKFSLWRWLRNFHN--------DMAPPYYADLGKKAN-DVFSKGYHFGVFKLDLKTKS 379
Q N F LW+ RNF+N +++ Y GKK+ +G++ G+ DL
Sbjct: 140 QTNIFDLWKQFRNFNNSQVFGMVENLSDWYLNKDGKKSVWPALGRGFNTGIIMFDLDKLR 199
Query: 380 ESG 388
++G
Sbjct: 200 KNG 202
>AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical
protein K07H8.8 protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +2
Query: 56 FNINQLRKLYDRLPFVDAAVTQETISCLRPD--GTIGQMIICKDEDGEIQCPNNETIQSQ 229
FN + YD L + + CL P TIG IC +D E NN TI ++
Sbjct: 94 FNQTFVPPFYDYLQDFTISPRYDISLCLIPKVVSTIGTAAICYIQDPEAFTKNNRTISTE 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,390,845
Number of Sequences: 27780
Number of extensions: 307230
Number of successful extensions: 895
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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