Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14e19
         (603 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356     36   0.025
11_06_0661 - 26009838-26010950,26011302-26011802                       30   1.6  
08_01_0907 + 8949102-8949160,8949662-8949842,8951816-8951941,895...    29   2.8  
09_06_0347 + 22445962-22446154,22446495-22446616,22446764-224468...    28   6.5  
07_03_0358 - 17177253-17177369,17177635-17177931,17178961-171790...    28   6.5  
04_04_0799 + 28143878-28145042,28145127-28145290,28146008-281460...    28   6.5  
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970...    28   6.5  
09_02_0386 - 8371631-8372125,8373696-8374139                           27   8.7  
07_01_0453 + 3420727-3420800,3421666-3421792,3422348-3422431,342...    27   8.7  
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13...    27   8.7  
06_01_0546 + 3895007-3895888,3896506-3896682                           27   8.7  
06_01_0543 + 3883184-3884065,3884683-3884859                           27   8.7  
06_01_0533 + 3845128-3846009,3846627-3846803                           27   8.7  
04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158     27   8.7  
03_04_0204 - 18444903-18445054,18445445-18445676,18445765-184458...    27   8.7  
02_05_0585 + 30155021-30155910,30156130-30157006                       27   8.7  

>12_02_0472 - 19469512-19469541,19469755-19469785,19469975-19471356
          Length = 480

 Score = 35.9 bits (79), Expect = 0.025
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +2

Query: 53  STKKQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNME 232
           S+KK+++   G KL  KP P    K    +    + K  KK+ +  +N   PP+ +RN+ 
Sbjct: 189 SSKKKLVKSVGSKLTGKPPPSPELKAGEKSTPPSSHKSKKKMTTTRTNSLKPPKPKRNLV 248

Query: 233 RV 238
            +
Sbjct: 249 EI 250


>11_06_0661 - 26009838-26010950,26011302-26011802
          Length = 537

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +2

Query: 221 RNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALE 343
           R ++ VE++A   AR LR  W+E+ AIL  E    +++ALE
Sbjct: 493 RQLQAVELVAHTAARCLRLQWEERPAIL--EVVANLETALE 531


>08_01_0907 +
           8949102-8949160,8949662-8949842,8951816-8951941,
           8952082-8952092,8952237-8952360,8952447-8952546,
           8952807-8952849,8953033-8953153
          Length = 254

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/68 (25%), Positives = 36/68 (52%)
 Frame = +2

Query: 44  LN*STKKQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRR 223
           L+ S  K+I P+  + ++     L    P LA  +E          S+  +++IPP+L++
Sbjct: 105 LSGSFDKEISPQLKQSIKMMERCLPIQPPCLARTTEMGKPTALFQLSDSFDKEIPPQLKQ 164

Query: 224 NMERVEML 247
           +M+++ +L
Sbjct: 165 SMKKIGLL 172


>09_06_0347 +
           22445962-22446154,22446495-22446616,22446764-22446885,
           22447405-22447594,22447874-22448014,22448257-22448724,
           22448842-22449609,22450185-22450373
          Length = 730

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 200 KIPPRLRRNMERVEMLARPTARRLRSLWDEKC-AILPPERRDKIKSALEEDYFLSPEQTE 376
           +I  +L   ME V+ LAR TA  L + + E+C  IL  E+R      + +D  L  ++  
Sbjct: 273 EIEVKLATTMEEVDRLAR-TADELAAKFQEQCEKILVLEKRSAHSDRIIKDLMLQRDKAV 331

Query: 377 QYFQAL 394
           +  +A+
Sbjct: 332 REAEAI 337


>07_03_0358 - 17177253-17177369,17177635-17177931,17178961-17179032,
            17179117-17179383,17179752-17179910,17180194-17180295,
            17180696-17180767,17181105-17181200,17181710-17181871,
            17181941-17182021,17182837-17183094,17183173-17183275,
            17183412-17183542,17184827-17184919,17184999-17185099,
            17186271-17186355,17186487-17186701,17186779-17186842,
            17187128-17187214,17188922-17189022,17190206-17190397,
            17190533-17190599,17191211-17191351
          Length = 1020

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +2

Query: 260  ARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSG-PGGTV 436
            AR++ +L DE       +R+ +++   +ED      Q EQ+F+ + E  K  S  PG   
Sbjct: 839  ARQI-ALADEARRKAEEQRKAQLERRKQEDELKQVMQQEQHFERVKEQWKTSSNTPGKRK 897

Query: 437  NRKELIDKQKELQQRQK 487
            +R +  D++   ++R+K
Sbjct: 898  DRSKHEDEEGGGEKRRK 914


>04_04_0799 +
           28143878-28145042,28145127-28145290,28146008-28146070,
           28146268-28146491,28146850-28147555
          Length = 773

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
 Frame = +2

Query: 152 QNVKILKKVDSEGSN-QKIPPR---LRRNMERVEMLARPTARRLRSLWDEKCAILPPERR 319
           +N K LK +D  G+   KI      LR+   ++++  R  A+    +   +   L P+  
Sbjct: 475 KNSKRLKLLDQRGAEAHKIDATRNLLRKLSTKIKIAVRVIAKVSTKINKVRDEELGPQVN 534

Query: 320 DKIKSALEE-DYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQ-QRQKWL 493
             I+  ++   Y L    T+  FQ +SE+    S     V+R+   D   EL+ +  KW+
Sbjct: 535 ALIQGFIKMWQYKLHSYHTQ--FQVISEAKNLVS----VVSRENGPDLAMELELELIKWI 588

Query: 494 VNFSAQVAYH 523
           +NFS+ V  H
Sbjct: 589 INFSSWVNAH 598


>02_05_0417 -
           28796121-28796743,28796829-28796925,28797010-28797093,
           28797173-28797234,28797316-28797460,28797542-28797961,
           28798041-28798090,28798163-28798349,28798426-28798680,
           28798785-28798953,28799044-28799177,28799291-28799446,
           28799534-28799719,28799798-28799962,28800074-28800190,
           28800553-28800762,28800850-28801049,28801135-28801405,
           28801481-28801547,28801644-28801942,28802425-28802991
          Length = 1487

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
 Frame = +2

Query: 377 QYFQALSESSKR--WSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHL-------- 526
           QYFQ +++  K   W       N  EL   +K +  R++WL NF  Q   HL        
Sbjct: 589 QYFQDIAKHKKDFVWKNDQDD-NDIELAFSKKRITDRKEWLTNF--QSGTHLDTEGKYIK 645

Query: 527 -CDYIAKGQKEMLVSNRLRSIADVV 598
             D+I K   +  +++ LRSI  +V
Sbjct: 646 YSDFINKELIQFSMADLLRSIPSMV 670


>09_02_0386 - 8371631-8372125,8373696-8374139
          Length = 312

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +2

Query: 392 LSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHL 526
           +SESS+  S     V+  E+   +  LQ++Q W    +AQ+A HL
Sbjct: 1   MSESSEEISSSDNEVDPTEIYTMEDYLQRQQAWNA-AAAQLASHL 44


>07_01_0453 +
           3420727-3420800,3421666-3421792,3422348-3422431,
           3422550-3422644,3423063-3423154,3423326-3423379,
           3424221-3424273,3424472-3424539,3424777-3424852,
           3425159-3425242,3425793-3425941,3426375-3426492,
           3426583-3426699,3426950-3427170,3427503-3427536,
           3427585-3427685,3427832-3427943,3428379-3428504,
           3428579-3428716,3428808-3428858,3428938-3429050,
           3430253-3430318,3430582-3430729,3430826-3430930,
           3431017-3431118,3431495-3431567,3431647-3431813,
           3431906-3432028
          Length = 956

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +2

Query: 5   IRHCLFFCLVSQ*LN*STKKQIMPKT-GKKLENKPEPLKSSKPELATDSEQNVKILKKVD 181
           +R  L      Q LN ST++    K    KL N  + L  + P+ +  +  +V +  K D
Sbjct: 584 LRFTLSMGTAGQDLNLSTERLTSNKAFTNKLWNAGKFLLQNLPDRSDATAWDVLLANKFD 643

Query: 182 SEGSNQKIP 208
           +E S QK+P
Sbjct: 644 TEASLQKLP 652


>07_01_0020 -
           127855-129156,129240-129365,129811-129865,130047-130177
          Length = 537

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +2

Query: 116 KSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKC 295
           K ++ + A   E  ++   + + EG+N K+   + R  +RVE     T R+ R L +E C
Sbjct: 176 KVAEEKAAAREELKLERHHRRELEGANGKLVKEVARARQRVE-----TERKARELMEEAC 230

Query: 296 AILPPE 313
             L  E
Sbjct: 231 EELSKE 236


>06_01_0546 + 3895007-3895888,3896506-3896682
          Length = 352

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 302 LPPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGG 430
           +P    D+I +A  E + L PE+ E+Y   ++ +     G GG
Sbjct: 94  MPEPFLDEILAATREFFHLPPEEKERYSNVVAAADADGVGAGG 136


>06_01_0543 + 3883184-3884065,3884683-3884859
          Length = 352

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 302 LPPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGG 430
           +P    D+I +A  E + L PE+ E+Y   ++ +     G GG
Sbjct: 94  MPEPFLDEILAATREFFHLPPEEKERYSNVVAAADADGVGAGG 136


>06_01_0533 + 3845128-3846009,3846627-3846803
          Length = 352

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 302 LPPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGG 430
           +P    D+I +A  E + L PE+ E+Y   ++ +     G GG
Sbjct: 94  MPEPFLDEILAATREFFHLPPEEKERYSNVVAAADADGVGAGG 136


>04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158
          Length = 974

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -2

Query: 311 REAKL-RIFRPIKSAGDEPLAVPTFPPAPCYDVSVVVFSGYFLQN--PPFLKFLHSVRNL 141
           R+A L R F P  + G E +A+    PAP Y    V F  + +    PPF  F   V  L
Sbjct: 22  RQAGLPRRFMPESATGREVVALGEGRPAPHYPGRSVFFLSFTMAGLVPPFSSFFMDVLEL 81


>03_04_0204 -
           18444903-18445054,18445445-18445676,18445765-18445836,
           18446201-18446347,18446559-18446614,18446727-18446832,
           18446938-18447025,18447112-18447230,18448975-18449580,
           18449803-18449898,18450232-18450422,18453287-18453416,
           18453531-18453566
          Length = 676

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +3

Query: 300 FCLPKEETRLKAL*KKIIFLVPSKLNSIFKR*VNLRNVGRDQVER 434
           F  PKEE+R+    + ++ L   KL     R  NL+++G D VER
Sbjct: 429 FSAPKEESRVSEAARMVVQLEEEKLILQKVRKCNLKSIGSD-VER 472


>02_05_0585 + 30155021-30155910,30156130-30157006
          Length = 588

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
 Frame = +2

Query: 53  STKKQIMPKTGKKLENKPEPLKSSK--PEL--ATDSEQNV-KILKKVDSEGSNQKIPPR 214
           +T  +I+P+T  ++   PEP + +K  P++  + +S  +V K+L++ D    N K+ P+
Sbjct: 3   TTASKIIPQTLPEIPTTPEPQQYTKTAPDIPKSNNSRSSVPKLLQESDRGKLNHKLEPK 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,961,704
Number of Sequences: 37544
Number of extensions: 322153
Number of successful extensions: 1252
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)