Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14e18
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62639-1|AAD09364.1|  925|Caenorhabditis elegans lr protein.           29   2.3  
U62281-1|AAD09363.1|  925|Caenorhabditis elegans lipoprotein rec...    29   2.3  
AF185706-1|AAD56241.1|  925|Caenorhabditis elegans yolk receptor...    29   2.3  
AF036703-1|AAB88554.3|  925|Caenorhabditis elegans Receptor medi...    29   2.3  
U58757-9|AAM75377.1|  503|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U58757-8|AAC47918.3|  506|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>U62639-1|AAD09364.1|  925|Caenorhabditis elegans lr protein.
          Length = 925

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +1

Query: 541 CS*KLHCIVHASLCTKHCSKQLNGFRC-LLNNYQLQLE 651
           C  +  C  H  LC   C  +L  F C   N Y+L+ +
Sbjct: 337 CEDEDECATHGHLCQHFCEDRLGSFACKCANGYELETD 374


>U62281-1|AAD09363.1|  925|Caenorhabditis elegans lipoprotein
           receptor precursor protein.
          Length = 925

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +1

Query: 541 CS*KLHCIVHASLCTKHCSKQLNGFRC-LLNNYQLQLE 651
           C  +  C  H  LC   C  +L  F C   N Y+L+ +
Sbjct: 337 CEDEDECATHGHLCQHFCEDRLGSFACKCANGYELETD 374


>AF185706-1|AAD56241.1|  925|Caenorhabditis elegans yolk receptor
           RME-2 protein.
          Length = 925

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +1

Query: 541 CS*KLHCIVHASLCTKHCSKQLNGFRC-LLNNYQLQLE 651
           C  +  C  H  LC   C  +L  F C   N Y+L+ +
Sbjct: 337 CEDEDECATHGHLCQHFCEDRLGSFACKCANGYELETD 374


>AF036703-1|AAB88554.3|  925|Caenorhabditis elegans Receptor
           mediated endocytosis protein2 protein.
          Length = 925

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +1

Query: 541 CS*KLHCIVHASLCTKHCSKQLNGFRC-LLNNYQLQLE 651
           C  +  C  H  LC   C  +L  F C   N Y+L+ +
Sbjct: 337 CEDEDECATHGHLCQHFCEDRLGSFACKCANGYELETD 374


>U58757-9|AAM75377.1|  503|Caenorhabditis elegans Hypothetical
           protein C01B10.6b protein.
          Length = 503

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 311 RNGLQY-DCRRSGCQGSQLCQTLPRPLCEPAHVACTSHFKNPHAESLRAICKMQ 469
           ++G QY +C++    G+    TLP P       AC  +  +P+    + IC  Q
Sbjct: 329 QSGQQYCECKKCEFSGTNCETTLPDPCQSKQKRACGQNALSPYGVCYKNICSDQ 382


>U58757-8|AAC47918.3|  506|Caenorhabditis elegans Hypothetical
           protein C01B10.6a protein.
          Length = 506

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 311 RNGLQY-DCRRSGCQGSQLCQTLPRPLCEPAHVACTSHFKNPHAESLRAICKMQ 469
           ++G QY +C++    G+    TLP P       AC  +  +P+    + IC  Q
Sbjct: 332 QSGQQYCECKKCEFSGTNCETTLPDPCQSKQKRACGQNALSPYGVCYKNICSDQ 385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,263,527
Number of Sequences: 27780
Number of extensions: 287672
Number of successful extensions: 724
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)