Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14e17
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 40 0.002
11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229... 33 0.18
12_02_1174 - 26696869-26698191 33 0.24
11_06_0506 - 24380469-24380632,24381737-24383893,24384488-243845... 33 0.24
02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657 31 1.3
11_08_0069 + 28148713-28148829,28149205-28149327,28149372-28149824 30 1.7
10_08_0042 - 14383143-14383628,14383647-14384609,14384697-143864... 30 2.2
07_03_1085 - 23851852-23853165 30 2.2
02_02_0061 + 6468190-6471046,6471318-6471736 30 2.2
01_05_0777 + 25110356-25110662,25112569-25112789,25112880-251131... 30 2.2
04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680 29 2.9
01_05_0776 + 25072541-25073080,25073174-25073418,25073558-250739... 29 2.9
10_04_0018 - 7633860-7634134,7634525-7634858 28 6.7
03_05_0830 + 28034179-28035492 28 6.7
03_01_0605 - 4453409-4453692,4454541-4454594,4454706-4454812,445... 28 6.7
01_06_0390 - 28938485-28938751,28939924-28941282 28 6.7
04_04_0760 - 27837170-27837328,27837441-27837504,27837812-278381... 28 8.9
03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007 28 8.9
01_06_0866 - 32572002-32572541,32572806-32572984,32574330-325744... 28 8.9
01_05_0615 - 23678493-23678948,23679057-23679441,23680250-236805... 28 8.9
>10_08_0141 + 15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 267 DIQHFSPDDITVKIVDGF--VVVEALHEEKQDQHGWVSRRFTRRCPIPEGCDTDAVESRL 440
DIQ + + I V++V +VV + + W RF + P+P+GCD A+++RL
Sbjct: 941 DIQGYKKEHIKVQLVRSRRRLVVSGECPVAGETNRW--SRFRLQFPVPDGCDLKAIQARL 998
Query: 441 SSDGVLTVSMP 473
DGV+ V++P
Sbjct: 999 -HDGVIRVTLP 1008
>11_04_0365 - 16818468-16818514,16818619-16821706,16822860-16822919,
16823595-16823954
Length = 1184
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 508 GTLRSLEIRRCKGMDTVRTPSEESLDSTASVSQPSGIG-QRRVNRRDTQPC 359
GTLR LEIR C G+ T+RT + + +G ++N+ D Q C
Sbjct: 918 GTLRDLEIRVCNGLHTIRTQPALLIMWLYDCPKLGAVGTMPKLNKLDIQKC 968
>12_02_1174 - 26696869-26698191
Length = 440
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +3
Query: 258 INLDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEGCDTDAVESR 437
+ + + F + + V+ VD ++ A E G RF + +P+ CD DAV +R
Sbjct: 26 VEIALPGFRKEQVRVQ-VDNHGMLRATGERPPAARGGRWVRFKKDLRLPDNCDADAVRAR 84
Query: 438 LSSDGVLTVSMPL 476
D L +++PL
Sbjct: 85 F-DDHKLIITLPL 96
>11_06_0506 - 24380469-24380632,24381737-24383893,24384488-24384541,
24384543-24384597,24384914-24384916,24385192-24385231,
24385576-24385632,24388124-24388412,24389764-24389771,
24390633-24390688,24391207-24391488,24391651-24391811,
24391887-24392121,24392860-24392943,24393022-24393117,
24393333-24394055,24396523-24396987
Length = 1642
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 393 CPIPEGCDTDAVESRLSSDGVLTVSMPLQRRISNER----RVPIIQTGPVKISDEPKPE 557
C E C TD+ +LSS + T SM ++R + N R I+ P+K++D + E
Sbjct: 1570 CCCGEQCSTDSHVKQLSSGAMSTSSMVIERSLDNAEDGFVRAATIELRPLKLADSLRKE 1628
>02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657
Length = 1136
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +3
Query: 288 DDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPE-GCDTD-AVESRLSSDGVLT 461
D V V F + LH+E + GW S R T PE G + +++ + S G+L
Sbjct: 965 DSDMVAHVSDFGLARFLHQESEKSSGWASMRGTVGYAAPEYGIGNEVSIQGDVYSYGILL 1024
Query: 462 VSMPLQRRISNE 497
+ M ++R +++
Sbjct: 1025 LEMFTRKRPTDD 1036
>11_08_0069 + 28148713-28148829,28149205-28149327,28149372-28149824
Length = 230
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 559 ALILLKRRQQTENKLSQAHRQLPSAVYESIYVG 657
A L++R++ KLS +LPS +Y SI++G
Sbjct: 47 ACALMRRKKTHRTKLSLEKLRLPSLLYRSIFIG 79
>10_08_0042 -
14383143-14383628,14383647-14384609,14384697-14386443,
14387901-14388010,14388767-14389003
Length = 1180
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 532 FTGPVCMMGTLRSLEIRRCKGMDTVRTPSEESLDSTASVSQPSGIGQRRVNRRDTQP 362
F+G V ++ R LE+ C G+ PS + ++ PS +RR+ R QP
Sbjct: 124 FSGVVVVVVARRMLEVCCCSGVLGGSPPSSRTAGVSSPGLSPSRPSKRRIGRARVQP 180
>07_03_1085 - 23851852-23853165
Length = 437
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 LREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHE--EKQDQHGWV 371
L G+ + +D + ++ +D + F P ++++ + D EAL+E E D+ G++
Sbjct: 94 LYTGTIVTEDGKEKKVTIDFEPFKPINVSLYLCDNKFHTEALNELLESDDKFGFI 148
>02_02_0061 + 6468190-6471046,6471318-6471736
Length = 1091
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 288 DDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPE-GCDTD-AVESRLSSDGVLT 461
DD V V F + LH++ + GW S R T PE G + ++ + S G+L
Sbjct: 914 DDEMVAHVGDFGLARFLHQDPEQSSGWASMRGTTGYAAPEYGLGNEVSIHGDVYSYGILL 973
Query: 462 VSM 470
+ M
Sbjct: 974 LEM 976
>01_05_0777 +
25110356-25110662,25112569-25112789,25112880-25113127,
25113274-25113664,25113751-25114155,25115260-25115366,
25115833-25116170,25116206-25116486,25116645-25116889,
25116998-25117382,25117459-25117884
Length = 1117
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -3
Query: 483 GAVKAWTQLGLHQKRVWIPRRLCRSLRVSGSVV*TDGTPSRA 358
GAV AW + + W PRRL R+LR G GTP R+
Sbjct: 23 GAVLAWCAVRAMEWAWWRPRRLERALRAQG----LRGTPYRS 60
>04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680
Length = 628
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 486 ISNERRVPIIQTGPVKISD---EPKPECVDSIETPPANGE 596
+S+ER++P+ Q PV+ SD +P + S ET A E
Sbjct: 384 LSDERKIPVDQRSPVENSDSLSDPVDRALSSTETDGARNE 423
>01_05_0776 +
25072541-25073080,25073174-25073418,25073558-25073942,
25074058-25074483
Length = 531
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 510 WALCAR*RFGAVKAWTQLGLHQKRVWIPRRLCRSLRVSG 394
W+L A G V W L + W PRRL R+LR G
Sbjct: 16 WSLLAYGLVGPVLLWQAGRLLDRLWWRPRRLERALRAQG 54
>10_04_0018 - 7633860-7634134,7634525-7634858
Length = 202
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 343 KKSRISTAGCPVGSHDAARYPKAATQTPWNPDSLLMES*LCPCLY-SAESL 492
K T+GC + S D R + T + PD +L+E + L+ S ESL
Sbjct: 125 KNEEFRTSGCALDSRDDLRNDHENSLTDFPPDKVLIEDVMVVLLHESPESL 175
>03_05_0830 + 28034179-28035492
Length = 437
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 213 LREGSSIKKDKSKFQINLDIQHFSPDDITVKIVDGFVVVEALHE--EKQDQHGWV 371
L G+ + +D + ++ +D + F P + ++ + D EAL+E E D+ G++
Sbjct: 94 LYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFI 148
>03_01_0605 -
4453409-4453692,4454541-4454594,4454706-4454812,
4454865-4454928,4456996-4457896
Length = 469
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 178 YPGANFHGGSQDCVREVRLRRINLNSRS 261
+ GA +G + DC RE+R R + N+R+
Sbjct: 204 FAGAGMNGEAWDCFREMRARGVRGNART 231
>01_06_0390 - 28938485-28938751,28939924-28941282
Length = 541
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = +3
Query: 342 EEKQDQHGWVSRRFTRRCPIPEGCDTDAVESRLSSD-----GVLTVSMPLQRRISNERRV 506
+E +HGWVS + T E + D VE +S L ++ +E
Sbjct: 268 DETAPKHGWVSPKSTLNAECWESDEDDEVEEGMSQSATKRISALAITCSALPDWDSEDGW 327
Query: 507 PIIQTGPVKISDEPKPECVDSIE 575
+Q+ P ++S+ P P V + +
Sbjct: 328 IDLQSDPSEVSETPAPMVVTTAD 350
>04_04_0760 -
27837170-27837328,27837441-27837504,27837812-27838160,
27838906-27838960,27839489-27839821
Length = 319
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 342 EEKQDQHGWVSRRFTRRCP--IPEGCDTDAVESRLSSDGVLTVSMPLQRRISNERRVPI- 512
+++Q QH ++R +R + +G DT ++ L + V M L S E R+ +
Sbjct: 91 QQQQQQHNQLNRSCSRVLAQRLCKGTDTQKKDAALEILKEIKVLMEL----SKEMRLDLP 146
Query: 513 IQTGPVKISDEP 548
GPVK+ DEP
Sbjct: 147 TAAGPVKLMDEP 158
>03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007
Length = 261
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 264 LDIQHFSPDDITVKIVDGFVVVEALHEEKQDQHGWVSRRFTRRCPIPEGCDTDAVESRL- 440
+D+ F +++ V + + ++ E + D W RF + P+P CD A+ + +
Sbjct: 40 VDVSGFRKEELKV-LYNTSRKLKVAGERRADGGQWA--RFLKMFPVPRSCDAGAIRAVMD 96
Query: 441 SSDGVLTVSMP 473
+ + +L V +P
Sbjct: 97 NEEALLYVILP 107
>01_06_0866 - 32572002-32572541,32572806-32572984,32574330-32574430,
32574554-32574887,32574915-32575037,32575193-32575394,
32575915-32576097,32576332-32576436,32576553-32576760,
32577025-32577170,32577321-32577443,32577490-32577698,
32577931-32578152,32578189-32578198,32578710-32578763,
32580841-32581052,32581620-32581772,32582071-32582158,
32582192-32582290,32582660-32582907,32584806-32585049
Length = 1260
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 661 RSRHK*IHKLHLAIGDAPVTAYSPFAGGVSIESTHSGFGSSD 536
R+ K + +L + +GD PF G++I S+ GF +D
Sbjct: 952 RTWFKSVDQLPMNVGDLHYDPLFPFGFGLTINSSQPGFSGAD 993
>01_05_0615 -
23678493-23678948,23679057-23679441,23680250-23680545,
23680983-23681504
Length = 552
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 483 GAVKAWTQLGLHQKRVWI-PRRLCRSLRVSG 394
G V AW Q GL R+W PRRL ++LR G
Sbjct: 18 GLVLAW-QAGLQLHRLWWRPRRLEKALRARG 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,964,429
Number of Sequences: 37544
Number of extensions: 413643
Number of successful extensions: 1127
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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