Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14e16
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          43   2e-06
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      43   2e-06
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.1  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   2.7  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   3.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   8.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   8.3  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 27/115 (23%), Positives = 56/115 (48%)
 Frame = +3

Query: 168 CLPENYSVVEFPAIWNELRQNGQLCDGTIMCRDLKAIGVHRAILSAVSPYFKAIFINSLN 347
           CL  N       +++++L Q     D T+ C +  ++  H+ +LSA S YF+ + ++  N
Sbjct: 12  CLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEA-SLKAHKVVLSACSSYFQKLLLS--N 68

Query: 348 KGEPEETKIFVDVPSFYMNLILDYAYTGTCKVTAENVEYLLPYADKFDVVGVIQL 512
             +     +  DV    +  I+++ Y G   V+   ++ LL  AD+  + G+ ++
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEV 123


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 43.2 bits (97), Expect = 2e-06
 Identities = 32/124 (25%), Positives = 55/124 (44%)
 Frame = +3

Query: 168 CLPENYSVVEFPAIWNELRQNGQLCDGTIMCRDLKAIGVHRAILSAVSPYFKAIFINSLN 347
           CL  N       + +  LR +    D T+ C D +++  HR +LSA SPYF+ +  ++  
Sbjct: 8   CLRWNNYQSSITSAFENLRDDEDFVDVTLAC-DGRSLKAHRVVLSACSPYFRELLKSTPC 66

Query: 348 KGEPEETKIFVDVPSFYMNLILDYAYTGTCKVTAENVEYLLPYADKFDVVGVIQLCCQYL 527
           K       +  DV    ++ ++++ Y G   V   ++   L  A+   V G+ Q   Q  
Sbjct: 67  K---HPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLTQQADQTD 123

Query: 528 LQEL 539
             EL
Sbjct: 124 RDEL 127


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 541 FNSCSKYWQQSWITPTT 491
           F    KY  + W TPTT
Sbjct: 433 FKDAKKYLPERWTTPTT 449


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 426 TGTCKVTAENVEYLLPYADKFDVVGVIQLCCQY 524
           TGT     +  E  L Y D  +V+G+I  C  +
Sbjct: 218 TGTASEITQIQEATLVYKDGTNVMGMIVFCITF 250


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +1

Query: 79  QKPKILYVRLQ-LRDHV*TKRKLSRDKENVRVFLKIILW*NSQQFGMNYDKTVSSV 243
           +K KI   R Q +R ++  KR L++DK  VRV  ++    +   FG+  + T+SSV
Sbjct: 7   EKCKITANRQQVMRQNMKLKRHLAQDKVKVRVAEEV----DPLPFGV--ENTISSV 56


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = -1

Query: 194 YHRIIFRKTRTFSL--SRDNF 138
           YH  +++K RTF+L  + DN+
Sbjct: 51  YHPELYQKARTFNLVENLDNY 71


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = -1

Query: 194 YHRIIFRKTRTFSL--SRDNF 138
           YH  +++K RTF+L  + DN+
Sbjct: 51  YHPELYQKARTFNLVENLDNY 71


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +3

Query: 462 YLLPYADKFDVVGVIQLCCQYLLQELKPHNCLGIFKFA 575
           +++PY     + GV     +  L ++     LG+FK A
Sbjct: 57  FMVPYFIALALAGVPMFLMELSLGQMMTIGGLGVFKIA 94


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +3

Query: 462 YLLPYADKFDVVGVIQLCCQYLLQELKPHNCLGIFKFA 575
           +++PY     + GV     +  L ++     LG+FK A
Sbjct: 110 FMVPYFIALALAGVPMFLMELSLGQMMTIGGLGVFKIA 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,014
Number of Sequences: 438
Number of extensions: 4621
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)