Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14e14
         (437 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial ...    81   6e-16
BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p pro...    81   6e-16
AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA...    81   6e-16
BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p pro...    69   3e-12
AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA...    69   3e-12

>X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial
           ATPase couplingfactor 6 subunit protein.
          Length = 106

 Score = 81.0 bits (191), Expect = 6e-16
 Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
 Frame = +3

Query: 54  SKLVGLRAATTSMMVSXNLAAA--QKATDPIQQLFLDKIREYKQKSAGGKVPDASPAVXX 227
           S L G+R   T    +  + A    KA+DPIQQLFLDK+REYKQKSAGGK+ D++P +  
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIER 64

Query: 228 XXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPIDE 344
                      Q+G     DM  FP  +F + K+DPI +
Sbjct: 65  ELKTELDRVAKQFGSDGKTDMLKFPEFQFPDVKVDPITQ 103


>BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p
           protein.
          Length = 106

 Score = 81.0 bits (191), Expect = 6e-16
 Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
 Frame = +3

Query: 54  SKLVGLRAATTSMMVSXNLAAA--QKATDPIQQLFLDKIREYKQKSAGGKVPDASPAVXX 227
           S L G+R   T    +  + A    KA+DPIQQLFLDK+REYKQKSAGGK+ D++P +  
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIER 64

Query: 228 XXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPIDE 344
                      Q+G     DM  FP  +F + K+DPI +
Sbjct: 65  ELKTELDRVAKQFGSDGKTDMLKFPEFQFPDVKVDPITQ 103


>AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA
           protein.
          Length = 106

 Score = 81.0 bits (191), Expect = 6e-16
 Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
 Frame = +3

Query: 54  SKLVGLRAATTSMMVSXNLAAA--QKATDPIQQLFLDKIREYKQKSAGGKVPDASPAVXX 227
           S L G+R   T    +  + A    KA+DPIQQLFLDK+REYKQKSAGGK+ D++P +  
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIER 64

Query: 228 XXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPIDE 344
                      Q+G     DM  FP  +F + K+DPI +
Sbjct: 65  ELKTELDRVAKQFGSDGKTDMLKFPEFQFPDVKVDPITQ 103


>BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p
           protein.
          Length = 159

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 34/87 (39%), Positives = 44/87 (50%)
 Frame = +3

Query: 99  SXNLAAAQKATDPIQQLFLDKIREYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGP 278
           S +  A+ +  DPI Q+FLDK+REY+ KS  GK  D  P               QYGGG 
Sbjct: 27  SVSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLALQYGGGE 86

Query: 279 GIDMTAFPSLKFEEPKLDPIDEQAAPK 359
           G+DM  FP  K  +  +DPI     P+
Sbjct: 87  GVDMLEFPKFKLPDIDIDPISVDDLPE 113


>AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA
           protein.
          Length = 147

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 34/87 (39%), Positives = 44/87 (50%)
 Frame = +3

Query: 99  SXNLAAAQKATDPIQQLFLDKIREYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGP 278
           S +  A+ +  DPI Q+FLDK+REY+ KS  GK  D  P               QYGGG 
Sbjct: 15  SVSNTASLRYKDPIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLALQYGGGE 74

Query: 279 GIDMTAFPSLKFEEPKLDPIDEQAAPK 359
           G+DM  FP  K  +  +DPI     P+
Sbjct: 75  GVDMLEFPKFKLPDIDIDPISVDDLPE 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,224,636
Number of Sequences: 53049
Number of extensions: 375135
Number of successful extensions: 648
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)