BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14e08
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36149-1|AAA62837.1| 333|Homo sapiens G protein-coupled recepto... 30 5.9
BC095533-1|AAH95533.1| 333|Homo sapiens chemokine (C motif) rec... 30 5.9
BC069589-1|AAH69589.1| 333|Homo sapiens XC chemokine receptor 1... 30 5.9
BC069075-1|AAH69075.1| 333|Homo sapiens chemokine (C motif) rec... 30 5.9
BC030583-1|AAH30583.1| 699|Homo sapiens dynein, axonemal, inter... 30 5.9
AY275469-1|AAP32301.1| 333|Homo sapiens chemokine C motif recep... 30 5.9
AL160270-13|CAI13155.1| 699|Homo sapiens dynein, axonemal, inte... 30 5.9
AL160270-12|CAI13154.1| 289|Homo sapiens dynein, axonemal, inte... 30 5.9
AF190496-1|AAF19816.1| 699|Homo sapiens dynein intermediate cha... 30 5.9
AF091619-1|AAF18570.1| 699|Homo sapiens dynein intermediate cha... 30 5.9
>L36149-1|AAA62837.1| 333|Homo sapiens G protein-coupled receptor
protein.
Length = 333
Score = 30.3 bits (65), Expect = 5.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 120 CLLDMAVNCLCPNWLAVFSWFW 55
CL D+ CL P W++ + W W
Sbjct: 74 CLSDLVFACLLPVWISPYHWGW 95
>BC095533-1|AAH95533.1| 333|Homo sapiens chemokine (C motif)
receptor 1 protein.
Length = 333
Score = 30.3 bits (65), Expect = 5.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 120 CLLDMAVNCLCPNWLAVFSWFW 55
CL D+ CL P W++ + W W
Sbjct: 74 CLSDLVFACLLPVWISPYHWGW 95
>BC069589-1|AAH69589.1| 333|Homo sapiens XC chemokine receptor 1
protein.
Length = 333
Score = 30.3 bits (65), Expect = 5.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 120 CLLDMAVNCLCPNWLAVFSWFW 55
CL D+ CL P W++ + W W
Sbjct: 74 CLSDLVFACLLPVWISPYHWGW 95
>BC069075-1|AAH69075.1| 333|Homo sapiens chemokine (C motif)
receptor 1 protein.
Length = 333
Score = 30.3 bits (65), Expect = 5.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 120 CLLDMAVNCLCPNWLAVFSWFW 55
CL D+ CL P W++ + W W
Sbjct: 74 CLSDLVFACLLPVWISPYHWGW 95
>BC030583-1|AAH30583.1| 699|Homo sapiens dynein, axonemal,
intermediate chain 1 protein.
Length = 699
Score = 30.3 bits (65), Expect = 5.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 240 EVPTKPPPMRLNELPLYDNPHQIYKDYLEDLEKCPKAKSK 359
E T+PPP R N N +IY Y+E+LEK K K K
Sbjct: 210 ECQTEPPP-RTN-FSATANQWEIYDAYVEELEKQEKTKEK 247
>AY275469-1|AAP32301.1| 333|Homo sapiens chemokine C motif receptor
1 protein.
Length = 333
Score = 30.3 bits (65), Expect = 5.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 120 CLLDMAVNCLCPNWLAVFSWFW 55
CL D+ CL P W++ + W W
Sbjct: 74 CLSDLVFACLLPVWISPYHWGW 95
>AL160270-13|CAI13155.1| 699|Homo sapiens dynein, axonemal,
intermediate chain 1 protein.
Length = 699
Score = 30.3 bits (65), Expect = 5.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 240 EVPTKPPPMRLNELPLYDNPHQIYKDYLEDLEKCPKAKSK 359
E T+PPP R N N +IY Y+E+LEK K K K
Sbjct: 210 ECQTEPPP-RTN-FSATANQWEIYDAYVEELEKQEKTKEK 247
>AL160270-12|CAI13154.1| 289|Homo sapiens dynein, axonemal,
intermediate chain 1 protein.
Length = 289
Score = 30.3 bits (65), Expect = 5.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 240 EVPTKPPPMRLNELPLYDNPHQIYKDYLEDLEKCPKAKSK 359
E T+PPP R N N +IY Y+E+LEK K K K
Sbjct: 199 ECQTEPPP-RTN-FSATANQWEIYDAYVEELEKQEKTKEK 236
>AF190496-1|AAF19816.1| 699|Homo sapiens dynein intermediate chain
DNAI1 protein.
Length = 699
Score = 30.3 bits (65), Expect = 5.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 240 EVPTKPPPMRLNELPLYDNPHQIYKDYLEDLEKCPKAKSK 359
E T+PPP R N N +IY Y+E+LEK K K K
Sbjct: 210 ECQTEPPP-RTN-FSATANQWEIYDAYVEELEKQEKTKEK 247
>AF091619-1|AAF18570.1| 699|Homo sapiens dynein intermediate chain
DNAI1 protein.
Length = 699
Score = 30.3 bits (65), Expect = 5.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 240 EVPTKPPPMRLNELPLYDNPHQIYKDYLEDLEKCPKAKSK 359
E T+PPP R N N +IY Y+E+LEK K K K
Sbjct: 210 ECQTEPPP-RTN-FSATANQWEIYDAYVEELEKQEKTKEK 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,962,897
Number of Sequences: 237096
Number of extensions: 1671952
Number of successful extensions: 4942
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4942
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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