Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14e08
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-9|AAK21418.1|  201|Caenorhabditis elegans Hypothetical pr...    38   0.008
AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion transpo...    29   2.7  
AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion transpo...    29   2.7  
AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate perme...    29   2.7  
Z81143-4|CAB03516.1|  189|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U22831-8|AAK20070.2|  545|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AF098986-3|AAC67424.1|  832|Caenorhabditis elegans Hypothetical ...    29   3.6  
AF101315-1|AAC69225.2|  369|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z82077-2|CAB04940.1|  722|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    28   6.3  
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>U00052-9|AAK21418.1|  201|Caenorhabditis elegans Hypothetical
           protein K02F3.10 protein.
          Length = 201

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 28/122 (22%), Positives = 52/122 (42%)
 Frame = +3

Query: 261 PMRLNELPLYDNPHQIYKDYLEDLEKCPKAKSKMLHEYLQPHVTALRMSAQCNYCDFKCE 440
           P+++ +LP+Y   +   K      E  P          LQ     +R++ +  Y D   E
Sbjct: 42  PIKIEQLPIYAEDNAPLKQKFLPEEPLP----------LQREFATIRIACEQEY-DRVAE 90

Query: 441 LESMKEEICVSMRKAKTDFKAYMRDPKNLELRHGVVGIGALSGYLFASKRGIPGRLFFTS 620
              + +      +KA T   AY+ +      +   + +G ++G++   KRG  GRL  T+
Sbjct: 91  RFKVVDCAMTQTKKAATKCNAYLTEEWTALPKAAAITVGGMAGFVLGLKRGPVGRLLTTT 150

Query: 621 LG 626
           +G
Sbjct: 151 IG 152


>AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion
           transporter SULP-1b protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 541 PCLSSKFFGSLIYALKSVLAFLMLTQISSFMLSNSHLKSQ*LHCADI 401
           P +   FFGS  ++    L+FL +    S   S+SHL S  L CA I
Sbjct: 117 PQIIYAFFGSAQHSSLGALSFLSIMIYCSIEYSHSHLSSISLCCAFI 163


>AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion
           transporter SULP-1a protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 541 PCLSSKFFGSLIYALKSVLAFLMLTQISSFMLSNSHLKSQ*LHCADI 401
           P +   FFGS  ++    L+FL +    S   S+SHL S  L CA I
Sbjct: 117 PQIIYAFFGSAQHSSLGALSFLSIMIYCSIEYSHSHLSSISLCCAFI 163


>AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate permease
           family protein 1 protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 541 PCLSSKFFGSLIYALKSVLAFLMLTQISSFMLSNSHLKSQ*LHCADI 401
           P +   FFGS  ++    L+FL +    S   S+SHL S  L CA I
Sbjct: 117 PQIIYAFFGSAQHSSLGALSFLSIMIYCSIEYSHSHLSSISLCCAFI 163


>Z81143-4|CAB03516.1|  189|Caenorhabditis elegans Hypothetical
           protein ZK265.6 protein.
          Length = 189

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 426 DFKCELESMKEEICVSM-RKAKTDFKAYMRDPKNL 527
           D K  L   + E+CV M  +   DF+A  RDPKNL
Sbjct: 128 DRKFRLFHRETELCVYMLARHGEDFQAMTRDPKNL 162


>U22831-8|AAK20070.2|  545|Caenorhabditis elegans Hypothetical
           protein F47D12.9a protein.
          Length = 545

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 252 KPPPMRLNELPLYDNPHQIYKDYLED 329
           +PPP+RLNEL     P +I    LED
Sbjct: 23  EPPPVRLNELVTATEPEEIPLPKLED 48


>AF098986-3|AAC67424.1|  832|Caenorhabditis elegans Hypothetical
           protein C36C9.1 protein.
          Length = 832

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 216 PTVEAAKTEVPTKPPPMRLNELPLYDNPHQIYKDYLE 326
           PT ++++   PT PPP   + L  +    Q + DY++
Sbjct: 644 PTEDSSQDAPPTSPPPRISDSLTAFLEAQQDFNDYID 680


>AF101315-1|AAC69225.2|  369|Caenorhabditis elegans Hypothetical
           protein T22H9.4 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +2

Query: 221 SRSGQNRSANKTASNAPKRASPVRQPTPDI--QRLFGRSRKMSK 346
           S S  + S+N ++ +AP+  SP    +PD+  QR F + +++ K
Sbjct: 2   SSSSLSSSSNASSLSAPEGLSPNNSLSPDVGAQRFFSQGKRIPK 45


>Z82077-2|CAB04940.1|  722|Caenorhabditis elegans Hypothetical
           protein W09C5.5 protein.
          Length = 722

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 601 PGIPRFEAKRYPLKAPIPTTP 539
           PG P  +  R P+  PIPTTP
Sbjct: 151 PGAPGAQPSRPPILPPIPTTP 171


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
           protein Y26D4A.9 protein.
          Length = 1435

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +3

Query: 309 YKDYLEDLEKCPKAKSKMLHEYLQPHVTALRMSAQCNYCDFKCELESMKEEICVSMRKAK 488
           YK   E+++K  K K K+  E  +  V   +   Q    +F+ E+E +K+ +   + KAK
Sbjct: 713 YKKESEEVKKTGKNKDKV--EKTKEEVEKAKEEFQKVKEEFQKEVEKVKK-VEKELEKAK 769

Query: 489 -TDFKAYMRD 515
            +DFK Y+ D
Sbjct: 770 ESDFKVYLDD 779


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
            F40H6.5 protein.
          Length = 1288

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 571  YPLKAPIPTTPCLSSKFFGSLIY 503
            Y L APIP   C + +F+G+L++
Sbjct: 991  YNLSAPIPKLDCNTIQFYGNLLW 1013


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,842,908
Number of Sequences: 27780
Number of extensions: 267541
Number of successful extensions: 1055
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)