Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14e02
         (646 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GU66 Cluster: MRP-like ABC transporter; n=2; Oryza sa...    34   3.4  
UniRef50_O96204 Cluster: Putative uncharacterized protein PFB055...    33   7.8  
UniRef50_A7TPA8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q8GU66 Cluster: MRP-like ABC transporter; n=2; Oryza
            sativa|Rep: MRP-like ABC transporter - Oryza sativa
            subsp. japonica (Rice)
          Length = 1483

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +2

Query: 272  PTKFIKNQFFNR*LKQH*YFLICKSQNIFYTIDINCMIKNKCISMTKPNKY 424
            P+ FIK +F    L    Y L   S  ++YTI + CMI+N  +++ + N+Y
Sbjct: 1165 PSNFIKKEFVGMSLS---YGLSLNSL-VYYTISMTCMIENDMVAVERVNQY 1211


>UniRef50_O96204 Cluster: Putative uncharacterized protein PFB0555c;
           n=4; Plasmodium|Rep: Putative uncharacterized protein
           PFB0555c - Plasmodium falciparum (isolate 3D7)
          Length = 4091

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +2

Query: 239 SKVLSSKQHLAPTKFIKNQFFNR*LKQH*YFLICKSQN-IFYTIDINCMIKNKCISMTKP 415
           S V + K+H+   +F K    N+ L  +   L+ K QN + YT DI    KN    +   
Sbjct: 523 SLVKNMKKHIEQKEFFKRNI-NKNLFLNVCILLFKKQNFLLYTHDIKKEYKNINTCLE-- 579

Query: 416 NKYYLGSYNFRQVANSLHYFLHIY 487
              YL + N++    SL YFLH Y
Sbjct: 580 ---YLQNDNYQYDIYSLKYFLHNY 600


>UniRef50_A7TPA8 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 507

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
 Frame = +2

Query: 335 ICKSQNIFYTIDINCMIKNKCISMTKPNKYYLGSYNFRQVANSLHYFLHIYLAMNL---- 502
           IC S+NI    +    + N+C+       YYL   N    ++SL     + +   L    
Sbjct: 392 ICGSENITREHETTVRLANRCLRKVAWLDYYLNDSNNPSDSDSLLSKKSLPITTQLQSST 451

Query: 503 -ANQPTASFEQEKNMTSIRLESVPSNLN*ILRQQSLPL 613
             +   +SF +EK M SI + S  S+ +   R+++ PL
Sbjct: 452 RTSSSPSSFSKEKIMNSIYISSENSSTDSFERRKAKPL 489


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,085,668
Number of Sequences: 1657284
Number of extensions: 9339545
Number of successful extensions: 17222
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17220
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)