Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14e02
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23510-7|AAC46785.1|  261|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical pr...    29   2.8  

>U23510-7|AAC46785.1|  261|Caenorhabditis elegans Hypothetical
           protein R12C12.6a protein.
          Length = 261

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 144 NFIQERQIDSYLIEYPCRIELRRKVYSYSLLDFILVAVSV 25
           NF+ E  +D++L    CR E R  V    ++ F++  ++V
Sbjct: 127 NFVDETHMDAFLANCDCRYESRNTVLLKVVVIFVICVIAV 166


>Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical
           protein F20G4.1 protein.
          Length = 1615

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 269 APTKFIKNQFFNR*LKQH*YFLICKSQNIFYTIDINCMIKNKCISMTKPNK 421
           +PT+ ++ + F+R LK+H Y    +    + TIDI  ++K++ I     NK
Sbjct: 452 SPTRTLQ-ELFDRTLKEHDYTRARELAETYDTIDIYVVLKSEWIDKCSKNK 501


>U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical
           protein F55F8.3 protein.
          Length = 910

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/70 (24%), Positives = 35/70 (50%)
 Frame = +2

Query: 350 NIFYTIDINCMIKNKCISMTKPNKYYLGSYNFRQVANSLHYFLHIYLAMNLANQPTASFE 529
           N   T+DI+C    K +S++ P+ Y+L + + R V + +H      +    +N+P  S +
Sbjct: 45  NTSKTLDIDCNYNIKRLSIS-PSGYHLLASDERGVVHFVHLLSEFKIYTFRSNKPIGSLQ 103

Query: 530 QEKNMTSIRL 559
              + T + +
Sbjct: 104 WSPDATRVAI 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,773,112
Number of Sequences: 27780
Number of extensions: 247079
Number of successful extensions: 447
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)