Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14d22
(408 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF244812-1|AAG34567.1| 306|Homo sapiens SCAN domain-containing ... 29 4.6
AF229246-1|AAG33966.1| 306|Homo sapiens SCAND2 protein. 29 4.6
D87435-1|BAA13379.2| 1880|Homo sapiens KIAA0248 protein. 29 8.0
BC117682-1|AAI17683.1| 1855|Homo sapiens GBF1 protein protein. 29 8.0
BC032543-1|AAH32543.1| 699|Homo sapiens GBF1 protein protein. 29 8.0
AL356420-1|CAH72761.1| 1859|Homo sapiens golgi-specific brefeldi... 29 8.0
AL160011-3|CAH71625.1| 1859|Homo sapiens golgi-specific brefeldi... 29 8.0
AL121928-2|CAI12515.1| 1859|Homo sapiens golgi-specific brefeldi... 29 8.0
AF068755-1|AAD15903.1| 1859|Homo sapiens sec7 domain family memb... 29 8.0
>AF244812-1|AAG34567.1| 306|Homo sapiens SCAN domain-containing
protein 2 protein.
Length = 306
Score = 29.5 bits (63), Expect = 4.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 219 KTPILQDRPGLGKWRPGR 272
+ P+ + RPG G WRPGR
Sbjct: 225 RRPLQRRRPGTGPWRPGR 242
>AF229246-1|AAG33966.1| 306|Homo sapiens SCAND2 protein.
Length = 306
Score = 29.5 bits (63), Expect = 4.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 219 KTPILQDRPGLGKWRPGR 272
+ P+ + RPG G WRPGR
Sbjct: 225 RRPLQRRRPGTGPWRPGR 242
>D87435-1|BAA13379.2| 1880|Homo sapiens KIAA0248 protein.
Length = 1880
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 56 VFYEIFQHFLLSMSIQYKK-----KINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSK 220
+F + +H M + KK + KMP E KE ++ + ++ + V LY++
Sbjct: 504 LFESMREHLKFQMEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINY 563
Query: 221 DAD 229
D D
Sbjct: 564 DCD 566
>BC117682-1|AAI17683.1| 1855|Homo sapiens GBF1 protein protein.
Length = 1855
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 56 VFYEIFQHFLLSMSIQYKK-----KINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSK 220
+F + +H M + KK + KMP E KE ++ + ++ + V LY++
Sbjct: 483 LFESMREHLKFQMEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINY 542
Query: 221 DAD 229
D D
Sbjct: 543 DCD 545
>BC032543-1|AAH32543.1| 699|Homo sapiens GBF1 protein protein.
Length = 699
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 56 VFYEIFQHFLLSMSIQYKK-----KINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSK 220
+F + +H M + KK + KMP E KE ++ + ++ + V LY++
Sbjct: 483 LFESMREHLKFQMEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINY 542
Query: 221 DAD 229
D D
Sbjct: 543 DCD 545
>AL356420-1|CAH72761.1| 1859|Homo sapiens golgi-specific brefeldin A
resistance factor 1 protein.
Length = 1859
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 56 VFYEIFQHFLLSMSIQYKK-----KINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSK 220
+F + +H M + KK + KMP E KE ++ + ++ + V LY++
Sbjct: 483 LFESMREHLKFQMEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINY 542
Query: 221 DAD 229
D D
Sbjct: 543 DCD 545
>AL160011-3|CAH71625.1| 1859|Homo sapiens golgi-specific brefeldin A
resistance factor 1 protein.
Length = 1859
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 56 VFYEIFQHFLLSMSIQYKK-----KINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSK 220
+F + +H M + KK + KMP E KE ++ + ++ + V LY++
Sbjct: 483 LFESMREHLKFQMEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINY 542
Query: 221 DAD 229
D D
Sbjct: 543 DCD 545
>AL121928-2|CAI12515.1| 1859|Homo sapiens golgi-specific brefeldin A
resistance factor 1 protein.
Length = 1859
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 56 VFYEIFQHFLLSMSIQYKK-----KINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSK 220
+F + +H M + KK + KMP E KE ++ + ++ + V LY++
Sbjct: 483 LFESMREHLKFQMEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINY 542
Query: 221 DAD 229
D D
Sbjct: 543 DCD 545
>AF068755-1|AAD15903.1| 1859|Homo sapiens sec7 domain family member
protein.
Length = 1859
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 56 VFYEIFQHFLLSMSIQYKK-----KINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSK 220
+F + +H M + KK + KMP E KE ++ + ++ + V LY++
Sbjct: 483 LFESMREHLKFQMEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINY 542
Query: 221 DAD 229
D D
Sbjct: 543 DCD 545
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,299,510
Number of Sequences: 237096
Number of extensions: 883877
Number of successful extensions: 1884
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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