Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14d22
(408 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022985-8|AAB69966.1| 354|Caenorhabditis elegans Hypothetical ... 31 0.42
Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical pr... 29 0.98
U29154-4|AAA68420.2| 288|Caenorhabditis elegans Hypothetical pr... 29 0.98
Z77653-3|CAB01126.1| 462|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z75551-5|CAA99935.1| 462|Caenorhabditis elegans Hypothetical pr... 29 1.7
U58746-7|AAB00628.2| 461|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.2
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 5.2
AF100307-10|AAC68930.1| 295|Caenorhabditis elegans Hypothetical... 27 6.9
AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical... 26 9.1
>AF022985-8|AAB69966.1| 354|Caenorhabditis elegans Hypothetical
protein T15B7.13 protein.
Length = 354
Score = 30.7 bits (66), Expect = 0.42
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 190 VTLFNPSYCLDYLLLEFLWHFALVDFLLVLNRHT 89
VT+F+ Y +DY + W F ++ LL N T
Sbjct: 283 VTIFSAVYMIDYYMFVKKWTFQFIEILLTFNAST 316
>Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical
protein F49H6.11 protein.
Length = 327
Score = 29.5 bits (63), Expect = 0.98
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 280 LAREALYILLLKTEILVFV*HKFSFQFFYSNDLINKY 390
+ ++ ++LL I+ ++ ++F + F YS + I+KY
Sbjct: 114 ILQQTFHLLLFSLAIMSYLKYQFPYDFLYSQNYISKY 150
>U29154-4|AAA68420.2| 288|Caenorhabditis elegans Hypothetical
protein T07F12.4 protein.
Length = 288
Score = 29.5 bits (63), Expect = 0.98
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 297 QCFTGQTTFYRAAICPGLVYPVVSASFDRYRTP 199
QC TG+ F ++C +Y V A+FD Y P
Sbjct: 214 QCVTGEVPFDECSLCKLFLY-VAGANFDAYDPP 245
>Z77653-3|CAB01126.1| 462|Caenorhabditis elegans Hypothetical
protein T28H10.3 protein.
Length = 462
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 3 HFVTHFLKKHIINFLSILYFMKYFNTFY*VC 95
H H KK+ INF Y MKY +C
Sbjct: 398 HIAVHLFKKYCINFNEYEYAMKYVKVINNMC 428
>Z75551-5|CAA99935.1| 462|Caenorhabditis elegans Hypothetical
protein T28H10.3 protein.
Length = 462
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 3 HFVTHFLKKHIINFLSILYFMKYFNTFY*VC 95
H H KK+ INF Y MKY +C
Sbjct: 398 HIAVHLFKKYCINFNEYEYAMKYVKVINNMC 428
>U58746-7|AAB00628.2| 461|Caenorhabditis elegans Hypothetical
protein R05G6.10 protein.
Length = 461
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = -3
Query: 337 RQKLIFPFLIII----YTMLHGPDNILPGRHL 254
+QK++ PF +++ + + HG ILP HL
Sbjct: 358 QQKIVIPFFVLLLKDLFLIYHGHPRILPNAHL 389
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 101 QYKKKINKCKMPKEFKEQVIKTVTRI 178
+ K+K N+ K PK F+E++ K +T +
Sbjct: 1288 ELKRKFNEFKRPKGFEEKLEKVITTL 1313
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 101 QYKKKINKCKMPKEFKEQVIKTVTRI 178
+ K+K N+ K PK F+E++ K +T +
Sbjct: 1288 ELKRKFNEFKRPKGFEEKLEKVITTL 1313
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 101 QYKKKINKCKMPKEFKEQVIKTVTRI 178
+ K+K N+ K PK F+E++ K +T +
Sbjct: 1288 ELKRKFNEFKRPKGFEEKLEKVITTL 1313
>AF100307-10|AAC68930.1| 295|Caenorhabditis elegans Hypothetical
protein T12B5.4 protein.
Length = 295
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 76 LKYFIKYKIDKKLIMCFFRKCVTKC 2
+KY IKY +D K+ + F + V C
Sbjct: 268 MKYEIKYSVDNKIFVIFINRQVFCC 292
>AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical
protein Y39B6A.33 protein.
Length = 438
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 101 QYKKKINKCKMPKEFKEQVIKTVTRIEESHNVVGVLYLSKDAD 229
Q KKK K+ KE K + ++ + ++SHNV L K+ D
Sbjct: 289 QKKKKAKAQKLDKEEKRR-LEEKAKEQDSHNVYRTKQLHKELD 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,273,940
Number of Sequences: 27780
Number of extensions: 159830
Number of successful extensions: 439
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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