Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14d19
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23169-4|AAC46697.1|  706|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z78416-1|CAB01682.1|  425|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF293976-1|AAG17881.1|  425|Caenorhabditis elegans CAB-1 protein.      29   3.4  
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>U23169-4|AAC46697.1|  706|Caenorhabditis elegans Hypothetical
           protein C29H12.5 protein.
          Length = 706

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = +1

Query: 382 SILHNQILKGTKLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGF 561
           S+LH+ +L+    R ++   F+S+     KE   Y +++ I+ + Q   S +   + +  
Sbjct: 442 SLLHHPVLQEPTARSVECFYFHSMLASPMKEIIHYHANDKISDVLQRFISLYHTSQEAED 501

Query: 562 PEYIKTFLK 588
            +YI  F K
Sbjct: 502 KKYIMMFTK 510


>Z78416-1|CAB01682.1|  425|Caenorhabditis elegans Hypothetical
           protein C23H4.1 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 415 KLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEY 570
           K+ +  +L++Y  + EQ K+DD Y       +    +P+ F + E     E+
Sbjct: 90  KINKEDLLKYYGKEVEQYKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEH 141


>U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical
           protein F01F1.7 protein.
          Length = 730

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +1

Query: 439 RFYSVKTEQKKEDDD---YRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQG 597
           R + +K   +  D D   +R D +I++ G  +P P  + E +GFP+ +   +K  G
Sbjct: 265 RHWRMKELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIG 320


>AF293976-1|AAG17881.1|  425|Caenorhabditis elegans CAB-1 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 415 KLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEY 570
           K+ +  +L++Y  + EQ K+DD Y       +    +P+ F + E     E+
Sbjct: 90  KINKEDLLKYYGKEVEQYKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEH 141


>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein
            ZK593.4 protein.
          Length = 1477

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +1

Query: 325  QQIVETNVFHTHIIPKVQYSILHNQILKGTKLRELQILRFYSVKTEQKK 471
            Q + ET+ F+   I  V+Y I+H   +K      + +L  + +KT+ +K
Sbjct: 1022 QSLRETDWFYEKYINMVRYEIIHVAKIKSMIDAAIPVLSEFDLKTQLQK 1070


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,646,287
Number of Sequences: 27780
Number of extensions: 281777
Number of successful extensions: 697
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)