Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14d17
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.1  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   8.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.9  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 444 FVVIFRVFQLDF*FYIVIPC 385
           FVVI R   L + F +++PC
Sbjct: 223 FVVIIRRRTLYYFFNLIVPC 242


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 32  KNLC*NINHI 3
           K LC NINHI
Sbjct: 100 KQLCYNINHI 109


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 297 SSWEPEQFQMCLNGW 341
           SS  PEQF++ ++ W
Sbjct: 329 SSSTPEQFKVIIDNW 343


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 336 GWSWPEPIP 362
           GWSW E +P
Sbjct: 179 GWSWDEVMP 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,825
Number of Sequences: 438
Number of extensions: 3224
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)