Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14d15
         (493 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.1  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   5.4  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   9.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   9.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   9.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 412  PGTAPGSPVIRSATPFTT 465
            PGTA   P ++   PFT+
Sbjct: 1117 PGTADNKPQLKPQKPFTS 1134


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 361 RSSKPFIILITTPRSA*PGTAPGSPV 438
           R +KP + LIT+     PG AP   V
Sbjct: 495 RLNKPLMSLITSSEVRQPGKAPNYSV 520


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 344 LSNRIRYRCFAVDHRYNDSSHFRIDIVNVQ 255
           LSN  +Y  +   + YN   +++  I+N++
Sbjct: 85  LSNNYKYSNYNNYNNYNKKLYYKNYIINIE 114


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 372 TIYHPHHDSEIRVTRN 419
           T  H HHD   R +R+
Sbjct: 5   TTNHSHHDERFRQSRS 20


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 372 TIYHPHHDSEIRVTRN 419
           T  H HHD   R +R+
Sbjct: 5   TTNHSHHDERFRQSRS 20


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 372 TIYHPHHDSEIRVTRN 419
           T  H HHD   R +R+
Sbjct: 5   TTNHSHHDERFRQSRS 20


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 372 TIYHPHHDSEIRVTRN 419
           T  H HHD   R +R+
Sbjct: 5   TTNHSHHDERFRQSRS 20


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 372 TIYHPHHDSEIRVTRN 419
           T  H HHD   R +R+
Sbjct: 5   TTNHSHHDERFRQSRS 20


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 372 TIYHPHHDSEIRVTRN 419
           T  H HHD   R +R+
Sbjct: 5   TTNHSHHDERFRQSRS 20


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 372 TIYHPHHDSEIRVTRN 419
           T  H HHD   R +R+
Sbjct: 5   TTNHSHHDERFRQSRS 20


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 372 TIYHPHHDSEIRVTRN 419
           T  H HHD   R +R+
Sbjct: 5   TTNHSHHDERFRQSRS 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,602
Number of Sequences: 438
Number of extensions: 2254
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)