Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14d13
(596 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1045 - 34086936-34087029,34087093-34087406 30 1.6
01_06_0757 + 31737119-31737356,31738683-31738741,31738786-317389... 30 1.6
12_02_1130 + 26353501-26354218,26354878-26354967,26355080-26355555 29 3.7
08_01_0428 + 3764322-3764852,3765005-3765284,3765965-3766059 29 3.7
04_03_0801 - 19828175-19828770,19828913-19828994 29 3.7
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 29 3.7
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 29 3.7
12_01_0719 - 6344651-6344809,6344872-6345286,6345967-6346133 28 4.9
09_04_0382 + 17135554-17136468,17136762-17136833,17137675-171377... 28 4.9
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 28 4.9
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 4.9
06_01_0715 - 5193648-5193897,5193987-5194255,5195011-5195350,519... 28 4.9
05_01_0115 + 804674-804766,805729-806442 28 4.9
02_01_0468 + 3357043-3357226,3357695-3358155 28 4.9
04_04_1544 - 34273909-34274220,34274340-34274769,34274933-342750... 28 6.5
03_05_1092 - 30331323-30331463,30331562-30331648,30331825-303320... 28 6.5
10_08_0459 + 18092656-18092724,18092827-18092886,18092970-180930... 27 8.6
>01_06_1045 - 34086936-34087029,34087093-34087406
Length = 135
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 10/54 (18%)
Frame = +3
Query: 159 LVPKRIHQ--EKYHKVH---RLIN-----VPEETHRLKGNALAVYLRMQKVPQE 290
L+P R H KYH +H RLI+ +P E H +G ++ R +P+E
Sbjct: 59 LIPGRYHPIPRKYHAIHGRNRLISDKYHMIPREYHATRGRNCMIHDRFHMIPRE 112
>01_06_0757 +
31737119-31737356,31738683-31738741,31738786-31738940,
31740311-31740386,31740521-31740655,31741273-31741309,
31741817-31741839
Length = 240
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/82 (28%), Positives = 31/82 (37%)
Frame = +2
Query: 269 DAKSTAGNRGKTGAGVTGSRTGHASEKDSDNLPSGAVSPGLLRHIHNAARYRLPQCFEGA 448
DA + A RG+ G G GS +G + G S L +R LP C
Sbjct: 42 DATAAAAARGEGGGG--GSASGRQRRQRKREAEQGGGSERGLGLSGRRSRVDLPACLPAM 99
Query: 449 CVSVNQNSNTNWVLGHSLSFSS 514
V+ NS + H+L S
Sbjct: 100 GYGVHANSRRMAIFVHALHIGS 121
>12_02_1130 + 26353501-26354218,26354878-26354967,26355080-26355555
Length = 427
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 158 PCSEANSPRKVSQSPPIDKCAGGDAPPQRKCTCSVSEDAKSTAGNRGKTGAGVTGS 325
PC+ +SP +++ +P + AG A T DA++ R T TGS
Sbjct: 50 PCTAPSSPGRITTAPSRGRLAGSAAGTGSAATAGSGGDAEAANATR-TTSDAATGS 104
>08_01_0428 + 3764322-3764852,3765005-3765284,3765965-3766059
Length = 301
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 402 MCRSRPGLTAPLGRLSESFSLACPVLDPVTPAPVLPRFP 286
+C RP LT GRLS+ + PV P+P P P
Sbjct: 135 VCGGRPSLTVGDGRLSDDEKELRWEVRPVLPSPGRPELP 173
>04_03_0801 - 19828175-19828770,19828913-19828994
Length = 225
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 215 CAGGDAPPQRKCTCSVSE-DAKSTAGNRGKTGAGVTGSR 328
C GG PP +C C V + G+ G+ G G G +
Sbjct: 150 CCGGCVPPPPRCKCGVDGCGGGCSGGHGGECGGGGGGCK 188
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 227 LLRHIYQSVDFVILFLVNSLRNKDYFLHKYVQKYQIL 117
LL + YQ+ F +L L+NS D+ L+ + ++IL
Sbjct: 241 LLTYPYQAYSFTLLILINSPVYPDFLLNLTAESHRIL 277
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +2
Query: 152 SNPCSEANSPRKVSQSPPIDKCAGGDAPPQRKCTCSVSEDAKSTAGNRGKTGAGVTGSRT 331
+N A SP SQS P GG +PP + + +S + ++G G + S +
Sbjct: 1171 TNSSGSAPSPPSPSQSAPPANTGGGGSPPPSHGSPPAPKAVQSQPAPK-RSGDGGSSSDS 1229
Query: 332 GHASEKDSDN 361
G + E S +
Sbjct: 1230 GSSKEGGSSS 1239
>12_01_0719 - 6344651-6344809,6344872-6345286,6345967-6346133
Length = 246
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 323 SRT-GHASEKDSDNLPSGAVSPGLLRHIHNAAR 418
SRT G + D D LP+G + PG++R++ +R
Sbjct: 5 SRTRGGDGDGDGDGLPAGDLKPGVIRNLPTFSR 37
>09_04_0382 +
17135554-17136468,17136762-17136833,17137675-17137704,
17138744-17138817,17140022-17140367
Length = 478
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 194 QSPPIDKCAGGDAPPQRKCT 253
+ PP+ GGD PPQR+ T
Sbjct: 127 EPPPVGAADGGDMPPQRQST 146
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -3
Query: 372 PLGRLSESFSLACPVLDPVTPAPVLPRFPAVLFASSDTLQVHFL*GGASPPA 217
P G L +++S P + T P LP+ P++ + A PPA
Sbjct: 197 PSGVLDDAYSFYAPPMISTTLIPKLPKIPSISELFDEHALAQIFDAAADPPA 248
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 168 KRIHQEKYHKVHRLINVPEETHRLKGNALAVYLRMQKVPQEIEVKQ 305
+RIH+EK ++ R E+ + LK N + YLRM + + VKQ
Sbjct: 911 ERIHREKLDRIQR-----EKINLLKNNDVEGYLRMVQDAKSDRVKQ 951
>06_01_0715 -
5193648-5193897,5193987-5194255,5195011-5195350,
5195691-5195845,5196547-5196557,5197632-5197689,
5197855-5198004,5198074-5198169,5198398-5198818,
5198835-5198950,5199041-5199149,5199483-5199532,
5200936-5201004,5201366-5201459,5201550-5201820,
5202273-5202607,5202718-5202786,5202834-5202904
Length = 977
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 KSTAGNRGKTGAGVTGSRTGHASEKDSDNLPSGAVS-PG 388
+S +G+ + GAG+ GS G S +LP G ++ PG
Sbjct: 707 RSQSGSVSRVGAGLDGSAKGAGGGGSSSSLPVGTLALPG 745
>05_01_0115 + 804674-804766,805729-806442
Length = 268
Score = 28.3 bits (60), Expect = 4.9
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 366 GRLSESFSLACPVLDPVTPAPVLPRFPAVLFASSDTLQVHFL*GGA-SPPAHLSIG 202
GRL +S A P+L + A +LPR+ + DTL V GGA P A LS G
Sbjct: 167 GRLLQSVMEAGPLLQNLLVAGLLPRWRNPPPVALDTLPVGVRAGGAVYPGASLSPG 222
>02_01_0468 + 3357043-3357226,3357695-3358155
Length = 214
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 146 AKSNPCSEANSPRKVSQSPPIDKCAGGDAPPQRKCTCSVSEDAKSTAGNRG---KTGAGV 316
+ ++P S ++SP S G APP T + + + + G G K+GAG+
Sbjct: 133 SSASPPSSSSSPSSPSGGGGGGGAPAGQAPPGAPATPAGTNSSPANGGAAGGGAKSGAGL 192
Query: 317 TGSRTGHA 340
T + +G A
Sbjct: 193 TVAASGLA 200
>04_04_1544 -
34273909-34274220,34274340-34274769,34274933-34275030,
34275178-34275280,34275386-34275471,34275590-34275677,
34275773-34275886,34275975-34276179,34276530-34276557
Length = 487
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 231 HRLKGNALAVYLRMQKVPQEIEVKQERE*LDLGQDTLARKI 353
H+ GN + VY+ + QE+E ++E +DL L + +
Sbjct: 338 HKATGNPVLVYMAAGRFAQEVEKLSDKEAVDLVMSHLKKML 378
>03_05_1092 -
30331323-30331463,30331562-30331648,30331825-30332085,
30332231-30332636,30333702-30334240
Length = 477
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 521 PGGYKVLLSYIDKSKPSA 574
PGG+KVL+ Y D PSA
Sbjct: 449 PGGWKVLVEYYDSLTPSA 466
>10_08_0459 +
18092656-18092724,18092827-18092886,18092970-18093038,
18093134-18093178,18093706-18094332,18094424-18094597,
18094688-18094991,18095070-18095161,18095253-18095319,
18095407-18095478,18095613-18095830,18095979-18096113,
18096225-18096520,18096603-18096774,18096860-18096958,
18097048-18097179,18097273-18097373,18097460-18097649,
18097713-18097751
Length = 986
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +2
Query: 41 KSRNNLNNYKQMD----QEQNKFSLLSKVLKFGIFEHIYAKSNPCSEANSPRKVSQSPPI 208
K R+ N+Y ++ Q + FSLL +EH+++ N + + S P I
Sbjct: 543 KFRSRFNDYGNVENIFNQSRPLFSLLDSEDDVSDYEHVFSVQNEDEGSENVSPSSTQPFI 602
Query: 209 DKCAGGDAPPQRKCTCSVSEDAKSTAGNRGK 301
+ + P C ++E+ ++A + +
Sbjct: 603 SFQSLPETPDNDTCNTVINENPGTSAAHNSQ 633
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,899,512
Number of Sequences: 37544
Number of extensions: 326876
Number of successful extensions: 1249
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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