Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14d13
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    27   0.46 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   0.80 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.2  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   7.5  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.5  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.5  

>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 462 IKTRTPIGCWVTHYRSARFRLVAIKCYCHTSTKANLQPFRIL 587
           + TR P GCW T      +RL+ +  +  T   + ++  R L
Sbjct: 391 LTTRPPTGCWETAIGQELYRLLVVDFFISTVLLSAVRGVRYL 432


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 296  GKTGAGVTGSRTGHASEKDSDNLPSGAVSPGLL 394
            G TG+G  GS+ G  S       P G  S G++
Sbjct: 2043 GATGSGDNGSQHGGGSISGGGGTPGGGKSKGII 2075


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +2

Query: 230  APPQRKCTCSVSEDAKSTAGNRGKTGAGVTGSRTG 334
            APP  K     S  A S A   G  G G  G+  G
Sbjct: 1216 APPTSKRDRRTSGPAVSDAATEGAGGGGAAGAENG 1250


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
 Frame = +2

Query: 224 GDAPP--QRKCTCSVSEDAKSTAGNRGKTG----AGVTGSRTGHASEKDSDNLPSGAVSP 385
           GD  P  ++   C V +  K   G  GKTG     G+TG +         D  PSG   P
Sbjct: 530 GDMGPLGEKGDACPVVKGEKGLPGRPGKTGRDGPPGLTGEKGEPGLPVWKDRGPSGPSGP 589


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 410 AARYRLPQCFEGACVSVNQNSNTNWVLGHSLSFSSVSPGGY 532
           ++R  L  CF G C   N  +N +     S S  S  P G+
Sbjct: 11  SSRGLLEICFAGRCDLDNNKTNCHCARNLSHSLLSFGPFGF 51


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 275 KSTAGNRGKTGAGVTGSRTGHASEKDSDNLP 367
           +S AGNR   GAG  G   G+      D +P
Sbjct: 91  QSQAGNRSYGGAGGVGGAGGYDYGVGFDPIP 121


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 463  INGNACSFETLR*SVSGCIMNV 398
            I  N  SF  +  +VSGCI+N+
Sbjct: 1631 IRHNIQSFREILSNVSGCIVNI 1652


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,718
Number of Sequences: 2352
Number of extensions: 12484
Number of successful extensions: 240
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)