Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14d05
(523 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93379-4|CAB07588.1| 306|Caenorhabditis elegans Hypothetical pr... 34 0.054
Z81531-4|CAB04318.1| 285|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 30 1.2
Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical pr... 29 1.5
AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical ... 29 2.0
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 27 6.2
AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical ... 27 6.2
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 27 6.2
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeo... 27 8.1
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 27 8.1
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 27 8.1
AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protei... 27 8.1
>Z93379-4|CAB07588.1| 306|Caenorhabditis elegans Hypothetical
protein F21H7.5 protein.
Length = 306
Score = 34.3 bits (75), Expect = 0.054
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 149 SKQISKDASTKSKTCSESAVSTKSVIKPKKTAKSDSNFASNKCPTM 286
SK++ +D++ KSK+ S S+KS K + K D N A N CPT+
Sbjct: 108 SKKLRRDSTDKSKS-QRSKRSSKSKKCDKSSKKCDLNKAKNLCPTV 152
>Z81531-4|CAB04318.1| 285|Caenorhabditis elegans Hypothetical
protein F36D3.4 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.16
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +2
Query: 71 TSKASYGGCRYDKTQKCCRLPRKIIASKQISKDASTKSKTCSESAVSTKSVIKPKKTAKS 250
+ K S+G + K++K + +K + ++ SKD S+KSK S+ S K K + K
Sbjct: 67 SGKPSHG--KSSKSKKSSKSEKKKL--RRESKDKSSKSKRSKRSSKSKKC---DKSSKKC 119
Query: 251 DSNFASNKCP 280
D N A N CP
Sbjct: 120 DLNKAKNLCP 129
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/93 (25%), Positives = 37/93 (39%)
Frame = +2
Query: 194 SESAVSTKSVIKPKKTAKSDSNFASNKCPTMPISICEKCGDXXXXXXXXXXXXKHNILYT 373
S S+ ST S + AK +N A + C P +CG NI
Sbjct: 1671 SSSSSSTSSASPLQGGAKPSTNQARHYCQ-FP-----ECGKNFSSEWNLARHTPDNINLI 1724
Query: 374 LKSNRKYYQDEKISSIEQFYKNTNFEQSATSIR 472
+ ++KY + I +QF NTN+ T ++
Sbjct: 1725 AEQSKKYQLEHVIRMADQFMMNTNYTTPPTHVQ 1757
>Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical
protein C27D8.2 protein.
Length = 500
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +2
Query: 146 ASKQISKDASTKSKTCSESAVSTKSVIKPKKTAKSDSNFASNKCPTMPISICE 304
A KQISK KSK V K K KK D N K P I E
Sbjct: 368 AKKQISKSTKKKSKCACIEYVKNKLTEKKKKNPFKDPNAVKVKPPGTNSKISE 420
>AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical
protein Y39A3CR.3 protein.
Length = 975
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 59 SVSFTSKASYGGCRYDKTQKCC-RLPRKIIASKQISKDASTKSKTCSESAVSTKSVIKPK 235
++ F + S+ ++ + CC R R I +Q ++ S++ + SA ST S+
Sbjct: 400 AMKFANNDSFLWQQFALSAICCGRFSRAIRVFEQSILASTIASESLTSSASSTSSISSQN 459
Query: 236 KTAKSDSNFASNKCPTMPIS 295
T+K+ N N+ P P S
Sbjct: 460 STSKAQ-NLHQNRRPKSPDS 478
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
F54D1.6 protein.
Length = 1423
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 185 KTCSESAVSTKSVIKPKKTAKSDSNFASNKCPTMPISICEKCGD 316
+TC + +T ++P ++ + + +CP P SI + CGD
Sbjct: 1154 QTCRDMQQNTNINMQPLQSQLT-GEYGQTQCPDNPSSIIQDCGD 1196
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 137 KIIASKQISKDAST--KSKTCSESAVSTKSVIKPKKTAKSDSNFASNKCPTM-PISICEK 307
K +A+K D KS T S+S KSV K + T KS S+ + C+K
Sbjct: 177 KELATKMYEDDLKKQGKSSTSSKSGKKAKSV-KSRSTKKSSSSTGLKSSKNSNKLMGCDK 235
Query: 308 CG 313
CG
Sbjct: 236 CG 237
>AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical
protein F47G6.3 protein.
Length = 346
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 149 SKQISKDASTKSKTCSESAVSTKSVIKPKKTAKSDSNFASNKCP 280
SK ++ + KSK ES V K IK KKT + ++NF + K P
Sbjct: 132 SKAMAVETEQKSK---ESKVEKKEEIK-KKTVRRETNFITYKRP 171
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 155 QISKDASTKSKTCSESAVSTKSVIKPKKTAKSDSNF 262
Q+ + ++CS S++S+ + +K T SDS+F
Sbjct: 252 QLDAHFNVSVQSCSSSSLSSPAALKHDSTVSSDSDF 287
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 264 AKFESDFAVFFGFITD 217
A+ +SD VFFGF+TD
Sbjct: 1285 ARSQSDIQVFFGFVTD 1300
>Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical
protein F02E9.3 protein.
Length = 319
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/62 (20%), Positives = 27/62 (43%)
Frame = +2
Query: 35 TTT*YDMMSVSFTSKASYGGCRYDKTQKCCRLPRKIIASKQISKDASTKSKTCSESAVST 214
T YD + T+ + G R +KT++ R + A + ++ + S + S +
Sbjct: 174 TAVAYDYRGIPLTAPTVFPGARSEKTRETTRKAARAFARMEKEREDANNSSSRSRKTYQS 233
Query: 215 KS 220
+S
Sbjct: 234 RS 235
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 264 AKFESDFAVFFGFITD 217
A+ +SD VFFGF+TD
Sbjct: 1285 ARSQSDIQVFFGFVTD 1300
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 264 AKFESDFAVFFGFITD 217
A+ +SD VFFGF+TD
Sbjct: 1285 ARSQSDIQVFFGFVTD 1300
>U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeobox
protein 21 protein.
Length = 495
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 146 ASKQISKDASTKSKTCSESAVSTKSVIKPKKTAK 247
A+K+ S S TC S ST +V P TAK
Sbjct: 206 ATKRQSSTTVRASSTCGSSVSSTSTVSSPDYTAK 239
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 59 SVSFTSKASYGGCRYDKTQ--KCCRLPRKIIASKQISKDASTKSKTCSESAVSTKSVIKP 232
S T+K + Y T + P K SK+ +K STKS S S++ +KS+ K
Sbjct: 120 STGKTTKTASSSRNYSNTSSTRSTTKPSKSSYSKRSTK--STKSLNYSSSSLGSKSIEKS 177
Query: 233 KKTAKSDSN 259
+++++ +
Sbjct: 178 RRSSRKSGS 186
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 267 LAKFESDFAVFFGFITDFVLTALSEHVLDFVEASLDICFEAI 142
+ +FE D+A F F D +L +L+ + +DIC+ I
Sbjct: 164 VGRFELDYARTFDFRADKILESLTNSLKRLQLTYIDICYVQI 205
>AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protein
protein.
Length = 495
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 146 ASKQISKDASTKSKTCSESAVSTKSVIKPKKTAK 247
A+K+ S S TC S ST +V P TAK
Sbjct: 206 ATKRQSSTTVRASSTCGSSVSSTSTVSSPDYTAK 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,136,941
Number of Sequences: 27780
Number of extensions: 213299
Number of successful extensions: 693
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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