Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14c02
(624 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 211 5e-56
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 100 3e-22
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 57 2e-09
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 54 2e-08
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 44 1e-05
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 40 4e-04
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 39 7e-04
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 33 0.025
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 32 0.077
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 31 0.18
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 25 6.7
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 211 bits (516), Expect = 5e-56
Identities = 95/158 (60%), Positives = 118/158 (74%)
Frame = +3
Query: 150 GFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQK 329
GF FE +QRN L +KGFP PKAT TGTTIVG+I D ++LGADTRAT +++DKNC+K
Sbjct: 9 GFDFEYYQRNLLLQEKGFPTPKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKK 68
Query: 330 IHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGH 509
+H ++ N++C GAGTAADTE T ++S +EL L+T R V TA T+LK+ LFRYQGH
Sbjct: 69 LHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGH 128
Query: 510 IGAALVLGGVDRTGPHIYCIYPHGSVDKLPYATMGSGS 623
IGA LVLGG D GPH++ I HGS DKLPY +GSGS
Sbjct: 129 IGAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGS 166
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 99.5 bits (237), Expect = 3e-22
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Frame = +3
Query: 222 KTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQ 401
+ GTTI + Y DGVIL AD+R T ++++ K+ L N++CC +G+AADT+
Sbjct: 22 RMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVAD 81
Query: 402 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVD-RTGPHIYCIYPH 578
+ L + R+ G V TAATL M ++ + + A L++ G D +TG +Y I
Sbjct: 82 LLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLG 141
Query: 579 GSVDKLPYATMGSGS 623
GS+ K P A GSGS
Sbjct: 142 GSLHKQPLAIGGSGS 156
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 56.8 bits (131), Expect = 2e-09
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Frame = +3
Query: 138 IPVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDK 317
+PVP S + RN K GTT + Y G+++ D+RA+ +++ +
Sbjct: 33 VPVPQSSL--YLRNLTDETKNKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQ 90
Query: 318 NCQKIHYLASNMYCCG--AGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRML 491
+K+ + N Y G AG AAD + + + L +L + V A+ +L +
Sbjct: 91 TVKKV--IEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSAASKILSNIT 148
Query: 492 FRYQGH-IGAALVLGGVDRTGPHIYCIYPHGSVDKLPYATMGSGS 623
+ Y+G+ + +L G + G +Y I G+ K ++GSGS
Sbjct: 149 YSYKGYGLSMGTMLAGTGKGGTALYYIDSDGTRLKGDLFSVGSGS 193
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 54.0 bits (124), Expect = 2e-08
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Frame = +3
Query: 207 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 386
A +A K G+T +G+ D V+LG + R T + ++ + +K+ + S++ C +G AD
Sbjct: 27 AIEAIKLGSTAIGVKTKDAVVLGVEKRLT-SPLMESHSVEKLFEIDSHIGCAISGLTADA 85
Query: 387 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-QGH----------IGAALVLG 533
+ Q + R +E+ + + R+ +G G AL++
Sbjct: 86 RTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIA 145
Query: 534 GVDRTGPHIYCIYPHGSVDKLPYATMGSGS 623
G+D GP +Y P G+ + +GSGS
Sbjct: 146 GIDEHGPQLYHSEPSGTYFRYEAKAIGSGS 175
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 44.4 bits (100), Expect = 1e-05
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 240 VGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQL 419
+GI+ DG++L A+ + T + +++ +K++++ NM C AG AD + + A ++
Sbjct: 35 LGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILI-NYARRV 93
Query: 420 ELQRLHT-GRTVPVETAATLLKRMLFRYQGH 509
Q L T +P E L++R+ QG+
Sbjct: 94 GQQYLQTFNEEMPCE---QLVRRVCDLKQGY 121
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 39.5 bits (88), Expect = 4e-04
Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Frame = +3
Query: 153 FSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKI 332
FS F N L Q + A A G T VGI DGV+L + + T + + +K+
Sbjct: 7 FSLTTFSPNGKLVQIEY-ALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIG-ASLEKV 64
Query: 333 HYLASNMYCCGAGTAADTEMTTQSV--ASQLELQRLHTG----RTVPVETAATLLKRMLF 494
+ ++ +G D + +Q ++++ + + E A+ + +
Sbjct: 65 CAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQS 124
Query: 495 RYQGHIGAALVLGGVDRTGPHIYCIYPHGSVDKLPYATMGSGS 623
G +L++ G+D GP +Y + P G+ +G S
Sbjct: 125 GGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSS 167
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 38.7 bits (86), Expect = 7e-04
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Frame = +3
Query: 210 PKATKTGTTIVGIIYADG-VILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 386
P GTT+ I DG IL DTR+ ++ + ++H + ++ +G AD
Sbjct: 8 PYVQNGGTTVA--IAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADA 65
Query: 387 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF--RYQGHIGAALVLGGVDRTGP-H 557
+ + +++L + R + ++ A +++ +L+ R+ + + G+D+ G
Sbjct: 66 LALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYY-VYTTVAGIDKEGKGE 124
Query: 558 IYCIYPHGSVDK 593
IY P GS ++
Sbjct: 125 IYSFDPVGSYER 136
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 33.5 bits (73), Expect = 0.025
Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 5/130 (3%)
Frame = +3
Query: 207 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 386
A KA + +T +GI DGVIL + T + N +I + ++ G D
Sbjct: 26 AYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVN-NRIGSVDRHIGIATTGFIPDG 84
Query: 387 EMTTQSVASQLELQRLHTGRTVPVETAATLLKR--MLFRYQGHI---GAALVLGGVDRTG 551
+ + + R + G +P A L LF + G + D G
Sbjct: 85 QHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEG 144
Query: 552 PHIYCIYPHG 581
PH+Y + P+G
Sbjct: 145 PHLYMVEPNG 154
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 31.9 bits (69), Expect = 0.077
Identities = 16/73 (21%), Positives = 39/73 (53%)
Frame = +3
Query: 225 TGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQS 404
TG++++ + +ADGV++ AD A+ ++ + +++ + N G +D + Q
Sbjct: 42 TGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQ-IQR 100
Query: 405 VASQLELQRLHTG 443
+ +LE++ + G
Sbjct: 101 LLEKLEIKEGNYG 113
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 30.7 bits (66), Expect = 0.18
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 5/144 (3%)
Frame = +3
Query: 207 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 386
A +A K G+ VG++ +L A R E K K+ + ++ AG A D
Sbjct: 25 ALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQK---KLIRIDDHIGIAIAGLAPDA 81
Query: 387 EMTTQSVASQLELQRLHTGRTVPVETAAT-LLKRMLFRYQGH----IGAALVLGGVDRTG 551
+ + + + + R +PV + + ++ Q + G ++ G D +G
Sbjct: 82 RVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDESG 141
Query: 552 PHIYCIYPHGSVDKLPYATMGSGS 623
PH+ P G V + +MGS S
Sbjct: 142 PHLLEFQPSGLVLEYLGTSMGSRS 165
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 25.4 bits (53), Expect = 6.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 569 NAVNMRTGSVNTSQNQSSPYMALIAK*HSFQQCGSSF 459
N + M+ S+ T + + +PY L+A + CGS +
Sbjct: 861 NIIPMQKPSLTTHETKQNPYDLLVALDSDRKACGSLY 897
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,544,781
Number of Sequences: 5004
Number of extensions: 50261
Number of successful extensions: 119
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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