Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14b23
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical ... 55 5e-08
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 29 3.1
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 29 3.1
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 28 5.4
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 28 5.4
Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical pr... 28 7.1
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 28 7.1
AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical ... 28 7.1
U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical pr... 27 9.4
AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical ... 27 9.4
AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical ... 27 9.4
>AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical
protein ZK973.3 protein.
Length = 451
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +2
Query: 488 LRKNEFNKEFTTGSIKCYDSNQLASNDPIEDTRCEAQCRMTSGLIMGVFDGHGGPACAQV 667
LR +E + +I D+ QLA+N+PIED A+C + + GVFDGHGG C++
Sbjct: 25 LRAHERSANVEDDAIMRVDTCQLAANNPIEDFYSAAKCLSSRAFLFGVFDGHGGQQCSRH 84
Query: 668 ISKRL 682
IS L
Sbjct: 85 ISTNL 89
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = +2
Query: 467 PQEVTTILRKN-EFNKEFTTGSIKCYDSNQLASNDPIEDT---RCEAQCRMTSGLIMGVF 634
P++V+ +++ E+N++ ++ + S S+ P+ +T + +SG GV
Sbjct: 555 PRDVSERIKERAEWNEDSFEWNVNAFQSTSSNSSTPLNNTIEVNEDGVFTRSSGADSGVS 614
Query: 635 --DGHGGPACAQVISKRLV 685
G+G PA +Q + KRLV
Sbjct: 615 VSGGNGTPATSQFLDKRLV 633
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = +2
Query: 467 PQEVTTILRKN-EFNKEFTTGSIKCYDSNQLASNDPIEDT---RCEAQCRMTSGLIMGVF 634
P++V+ +++ E+N++ ++ + S S+ P+ +T + +SG GV
Sbjct: 569 PRDVSERIKERAEWNEDSFEWNVNAFQSTSSNSSTPLNNTIEVNEDGVFTRSSGADSGVS 628
Query: 635 --DGHGGPACAQVISKRLV 685
G+G PA +Q + KRLV
Sbjct: 629 VSGGNGTPATSQFLDKRLV 647
>AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein.
Length = 782
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = +2
Query: 467 PQEVTTILRKN-EFNKEFTTGSIKCYDSNQLASNDPIEDT---RCEAQCRMTSGLIMGVF 634
P++V+ +++ E+N++ ++ + S S+ P+ +T + +SG GV
Sbjct: 569 PRDVSERIKERAEWNEDSFEWNVNAFQSTSSNSSTPLNNTIEVNEDGVFTRSSGADSGVS 628
Query: 635 --DGHGGPACAQVISKRLV 685
G+G PA +Q + KRLV
Sbjct: 629 VSGGNGTPATSQFLDKRLV 647
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/53 (20%), Positives = 26/53 (49%)
Frame = +2
Query: 431 QVQKDGVTVLPSPQEVTTILRKNEFNKEFTTGSIKCYDSNQLASNDPIEDTRC 589
Q+Q+ P PQ N+F ++ + + +DS+ ++S+ + + +C
Sbjct: 140 QIQRQQPIAQPIPQHTIPPSTSNQFQQQIQSAASSIFDSSVISSHQKLYEEQC 192
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 620 IMGVFDGHGGPACAQVISKRL 682
++ VFDGHGG C+Q + L
Sbjct: 197 VLAVFDGHGGHECSQYAAGHL 217
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 620 IMGVFDGHGGPACAQVISKRL 682
++ VFDGHGG C+Q + L
Sbjct: 197 VLAVFDGHGGHECSQYAAGHL 217
>Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical
protein C17G1.1 protein.
Length = 280
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 412 LFLEGSASAKRWGHSITFASRSHNNTPKKRIQQRIHNWLH*VLRFKSTRF 561
+ L+G A R GH I + ++NN I++ I +++ +R K T F
Sbjct: 131 VLLDGVYVASRKGHDIKYIFSTNNNNSTLDIREHIFSFMVPGIRQKRTTF 180
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
Frame = +2
Query: 602 RMTSGLI----MGVFDGHGGPACAQVISKRLV 685
R+ +GL+ +GVFDGHGG ++ + + L+
Sbjct: 43 RINNGLLDWTFVGVFDGHGGEHASEYVRRHLL 74
>AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical
protein Y48G9A.10 protein.
Length = 722
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 494 KNEFNKEFTTGSIKCYDSNQLASNDPIEDTRCEAQCRM 607
+ +F + + TGSI+ Y +++ + P+ C+ C M
Sbjct: 538 QGKFTQTYETGSIRFYANSRTETVRPVTSASCKLVCAM 575
>U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical
protein F59A6.10 protein.
Length = 155
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 519 VNSLLNSFFRSIVVTS*GEGNTVTPSFCTCAAFKEE 412
+NS+L+ FF I+V S + +T FC F +E
Sbjct: 1 MNSILHRFFLVIIVISFCDADTCIDKFCPPGTFCDE 36
>AL032640-5|CAA21644.1| 475|Caenorhabditis elegans Hypothetical
protein Y43F8A.5 protein.
Length = 475
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 166 LYSSIFDTIRQSIVIYNACIT 228
L SS+F + QS++ Y ACIT
Sbjct: 12 LTSSVFFPVFQSLIFYKACIT 32
>AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical
protein F56C3.2 protein.
Length = 457
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 139 ILVVRDSFN-LKYKIPNLKIHKQCCIFNIGT 50
IL R SF K++ P +++H+ +FN+GT
Sbjct: 388 ILTSRSSFQEAKFQFPRIELHQISELFNLGT 418
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,723,719
Number of Sequences: 27780
Number of extensions: 283281
Number of successful extensions: 794
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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