Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14b14
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical... 167 5e-42
AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical... 48 4e-06
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 41 9e-04
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 41 9e-04
AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical ... 38 0.008
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 36 0.033
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 36 0.033
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.54
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 31 0.54
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 0.54
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 2.2
AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical ... 29 3.8
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 28 5.0
U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical p... 28 6.6
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 28 6.6
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 6.6
AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensor... 28 6.6
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 28 6.6
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 6.6
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 6.6
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 6.6
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 6.6
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 6.6
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 27 8.7
U88183-3|AAB52656.2| 593|Caenorhabditis elegans Warthog (hedgeh... 27 8.7
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 27 8.7
>AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A2AL.13 protein.
Length = 168
Score = 167 bits (407), Expect = 5e-42
Identities = 86/169 (50%), Positives = 110/169 (65%), Gaps = 10/169 (5%)
Frame = +3
Query: 123 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXXXXGGIPKEVRCSHLLV 302
LP GWE R+SRS YY N T +SQWE+P A G K V+C HLLV
Sbjct: 6 LPAGWEKRQSRSNDRVYYFNTATGRSQWERPDESA--------FGKGSELKSVQCLHLLV 57
Query: 303 KHSGSRRPSSWREEHITRTKEEALDILQE-------YRRKIIDR---EAKFEELASTYSD 452
KH GSR PSSWR +HITR+K++A++IL+ Y +++ D E KF ELA +SD
Sbjct: 58 KHDGSRNPSSWRSDHITRSKDDAINILKSADLRNFHYEKELKDASNIEGKFRELAKQFSD 117
Query: 453 CSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTDSGIHIILR 599
CSSAKR GDLG F++ QMQKPFED +F+L+IG++S V T SG+H+I R
Sbjct: 118 CSSAKRGGDLGPFERRQMQKPFEDASFALEIGEMSDIVDTSSGVHLIYR 166
>AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical
protein Y48C3A.16 protein.
Length = 126
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +3
Query: 420 KFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTD 575
KF E+A+ YS+ A+ GDLG +G M PF+D AF+L +P++TD
Sbjct: 58 KFNEVAAQYSE-DKARSGGDLGWMTRGSMVGPFQDAAFALSNSSCDKPIYTD 108
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 75 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 215
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 102 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 215
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 90 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 215
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 75 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 215
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 102 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 215
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 90 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 215
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical
protein Y40B1A.2 protein.
Length = 120
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 132 GWEARKSRSTGMTYYLNKHTKKSQWEKPG-GPASXXXXXXXXXXGGIPKEVR 284
GW + S S+G YY NK T+ SQW+KP PA GG+ ++ R
Sbjct: 10 GWTEQMS-SSGKMYYYNKKTEISQWDKPAEWPAEGGSAERDKPKGGVNEKPR 60
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 57 RKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 215
+K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1323 QKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1377
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 57 RKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 215
+K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1337 QKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1391
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 93 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 215
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 93 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 215
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 372 LDILQEYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDV 527
+D+ QEY +++ REA+F L DC A D+G + + P D+
Sbjct: 61 VDLPQEYLNQLL-REARFYGLVKLVRDCEQAIARLDVGSGRPSERADPLSDI 111
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 93 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 215
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 123 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGG 221
LP GWE ++ G T+Y++ +K+Q+E+P G
Sbjct: 332 LPPGWEQVDDQNYG-TFYVDHINRKTQYERPYG 363
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 162 GMTYYLNKHTKKSQWEKPGG 221
G YY N TKK+QW KP G
Sbjct: 137 GKPYYYNTLTKKTQWVKPDG 156
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 387 EYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQ-MQKPFEDVAFSLKIGQLSQP 563
E R+K I+ + K EE D A+RD + R K+ + ++K + +K +
Sbjct: 205 EARKKYIETQKKAEENEEKRRDAQKAERDAHIARHKQAEALEKEKREQEEKMKKEDRERA 264
Query: 564 VHTDSGIHI 590
D HI
Sbjct: 265 TQKDRSDHI 273
>AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical
protein Y92H12BM.1 protein.
Length = 157
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 135 WEARKSRSTGMTYYLNKHTKKSQWEKPGG 221
WE S+ TG YY N + ++W+KP G
Sbjct: 9 WELFDSK-TGRYYYYNASSSVTKWQKPTG 36
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 282 RCSHLLVKHSGSRRPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCS- 458
+C L +K + + + + ++R ++E L+ + ++ + +A EE+ + Y D +
Sbjct: 24 KCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQ 83
Query: 459 SAKR-DGDLGRFKK 497
A+R G+L KK
Sbjct: 84 KAERIQGELEESKK 97
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 282 RCSHLLVKHSGSRRPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCS- 458
+C L +K + + + + ++R ++E L+ + ++ + +A EE+ + Y D +
Sbjct: 24 KCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQAEVNEAKALREEIQAKYDDVTQ 83
Query: 459 SAKR-DGDLGRFKK 497
A+R G+L KK
Sbjct: 84 KAERIQGELEESKK 97
>U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical
protein T02G5.13b protein.
Length = 298
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 393 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 512
R I+D+E+ E +S Y + GDL R ++ QM+K
Sbjct: 207 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 246
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 393 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 512
R I+D+E+ E +S Y + GDL R ++ QM+K
Sbjct: 308 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 347
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 85 CAGNANRFLRFLNCRRK 35
C GN+NRF+R +CR +
Sbjct: 34 CGGNSNRFMRRAHCRNR 50
>AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform j protein.
Length = 255
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 85 CAGNANRFLRFLNCRRK 35
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 85 CAGNANRFLRFLNCRRK 35
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 85 CAGNANRFLRFLNCRRK 35
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 85 CAGNANRFLRFLNCRRK 35
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 85 CAGNANRFLRFLNCRRK 35
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 85 CAGNANRFLRFLNCRRK 35
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 85 CAGNANRFLRFLNCRRK 35
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 321 RPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCSSAKR 470
R +SWR + KEE+ + L Y R + ++F L S SA R
Sbjct: 389 RSNSWRARPCSILKEESEEELSSYLRSASRQSSRFYPLHDFVSSPRSASR 438
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 321 RPSSWREEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCSSAKR 470
R +SWR + KEE+ + L Y R + ++F L S SA R
Sbjct: 389 RSNSWRARPCSILKEESEEELSSYLRSASRQSSRFYPLHDFVSSPRSASR 438
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 339 EEHITRTKEEALDILQEYRRKIIDREAKFEELASTYSDCSSAKR 470
E + K E + + +E RRK + E K + Y D + KR
Sbjct: 94 EAQLANMKSEHIRVAEEERRKTLGEETKHAHSRAEYQDQLARKR 137
>U88183-3|AAB52656.2| 593|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 6 protein.
Length = 593
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 342 EHITRTKEEALDILQEYRRKIIDREAKFEE 431
E + + EEAL +L RRK+ DR K+++
Sbjct: 170 EATSDSSEEALPLLSRNRRKLRDRVGKYDD 199
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 171 YYLNKHTKKSQWEKPGGP 224
++ K K SQW +PGGP
Sbjct: 564 FFQQKFYKNSQWARPGGP 581
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,052,125
Number of Sequences: 27780
Number of extensions: 275765
Number of successful extensions: 807
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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