Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14b09
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 221 4e-58
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 221 4e-58
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 171 3e-43
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 171 3e-43
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 171 3e-43
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 2.6
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 3.5
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 3.5
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 4.6
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 6.0
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 28 6.0
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 27 8.0
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 221 bits (539), Expect = 4e-58
Identities = 104/153 (67%), Positives = 124/153 (81%)
Frame = +1
Query: 154 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 333
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 334 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 513
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 514 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLK 612
E TTQGLDDL RCAQYKKDG FAKWRCV K
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHK 153
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 221 bits (539), Expect = 4e-58
Identities = 104/153 (67%), Positives = 124/153 (81%)
Frame = +1
Query: 154 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 333
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 334 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 513
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 514 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLK 612
E TTQGLDDL RCAQYKKDG FAKWRCV K
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHK 153
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 171 bits (417), Expect = 3e-43
Identities = 86/144 (59%), Positives = 106/144 (73%)
Frame = +1
Query: 178 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 357
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 358 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 537
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 538 DDLAQRCAQYKKDGCHFAKWRCVL 609
D LA+R A +KK GC FAKWRCVL
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVL 155
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 171 bits (417), Expect = 3e-43
Identities = 86/144 (59%), Positives = 106/144 (73%)
Frame = +1
Query: 178 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 357
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 358 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 537
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 538 DDLAQRCAQYKKDGCHFAKWRCVL 609
D LA+R A +KK GC FAKWRCVL
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVL 155
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 171 bits (417), Expect = 3e-43
Identities = 86/144 (59%), Positives = 106/144 (73%)
Frame = +1
Query: 178 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 357
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 358 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 537
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 538 DDLAQRCAQYKKDGCHFAKWRCVL 609
D LA+R A +KK GC FAKWRCVL
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVL 155
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 414 G*RWNPSGLPAGEEGHH--PRHQGRQGCRPAVRIGRRMHHPGSGRPRP 551
G R P P G GHH P H G P+ R G HH RP P
Sbjct: 382 GGRHGPPHCP-GRHGHHGPPHHHHHDGRSPS-RHGHHHHHHHGCRPFP 427
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 184 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 327
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 328 YRQLLFSSDA 357
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 184 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 327
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 328 YRQLLFSSDA 357
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 184 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 327
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 328 YRQLLFSSDA 357
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 421 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 525
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -1
Query: 601 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 512
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 575 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 414
S L +Q +S P VV SSS +S T ST+ P +S + PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +3
Query: 90 EG*RQRATGVRMEAGVRYQSNNVHLLSIPNS*AAGGAQEDRSSNCSSRKGYPGR*RIHRY 269
EG R+ VR E +R N ++S A + CS R P R IH +
Sbjct: 64 EGKRRSPPRVRREPPMRSPGRN-EVMSPERRYGTRSASSRSQNECSCRNRAPARSPIHDH 122
Query: 270 NGQAFAGHRR 299
+ HRR
Sbjct: 123 ERLNYRNHRR 132
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 318 PSSLSPTAIQL*RCALREHLWCDPVPRDPLP 410
P +++ T + RC + WCD PR PLP
Sbjct: 344 PDTMNSTTTLIGRC---DFDWCDDTPRVPLP 371
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 94 PSFCL*VALFLFYLLNFYKISIQTYSTVFSY 2
P C + F FY+ F+++ I ST+ Y
Sbjct: 256 PCICFHIPSFFFYIAPFFELEISFRSTIIIY 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,198,887
Number of Sequences: 27780
Number of extensions: 318906
Number of successful extensions: 1005
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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