Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14b06
         (633 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465...    29   4.1  
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443...    28   5.4  
05_01_0261 + 2001512-2001751,2001861-2002619                           27   9.4  
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108...    27   9.4  

>01_06_0923 +
           33044283-33044433,33044826-33045242,33046209-33046538,
           33046806-33046876,33047283-33047357,33047435-33047578,
           33047645-33047816,33047933-33048616,33048711-33048767,
           33048850-33048956,33049485-33049610,33050221-33050295,
           33050387-33050499,33050789-33050905,33051384-33051444,
           33051690-33051763,33052267-33052388,33052472-33052620,
           33053525-33053635,33053946-33054008,33054689-33054722,
           33055253-33055375,33055971-33056033,33056130-33056196,
           33056311-33056356,33056446-33056552,33056923-33056971,
           33057208-33057273,33057544-33057630
          Length = 1286

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 440 EGGTMFCPCMLIKQLVSWECGTCYCEHRDIIKFTATCLFVIKIYKAKATRCSIKVCQ 270
           +G T+FC      ++ SWE   C+    D++    + L  + IY+ K   CS   C+
Sbjct: 335 DGKTLFCGLDQSLKVFSWEPVRCH----DVVDMGWSNLADLSIYEGKLLGCSYHECR 387


>11_01_0563 +
           4423609-4423846,4424671-4426132,4428949-4429364,
           4430555-4432052,4432199-4432217,4432469-4432675,
           4432814-4433065
          Length = 1363

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +3

Query: 210 NNLEIVEMGGRL*MKEN----AYELTNFNRTSCSFSFINF 317
           NN+ I    GRL  KE+    A E  ++NRT  S +F+NF
Sbjct: 533 NNIAITNHSGRL-KKEDVERMAREARSYNRTRSSLAFLNF 571


>05_01_0261 + 2001512-2001751,2001861-2002619
          Length = 332

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 426 HSAAFITQKYKQSQWLHNLTLQDRSRAKCSTS 521
           H ++F ++ Y Q     N TL  RSRAKC+ +
Sbjct: 210 HCSSFSSRLYPQIDPAMNATLGVRSRAKCAAA 241


>05_01_0160 +
           1081416-1081647,1081840-1082012,1082169-1082246,
           1082372-1082529,1082558-1082709,1083232-1083290,
           1083633-1083912,1084235-1084470,1084601-1084744,
           1084845-1085012
          Length = 559

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = +2

Query: 554 IHCHI--CKLTFGKKKEYDEH 610
           + CH+  CKL+F KK   D+H
Sbjct: 443 VRCHLKDCKLSFSKKSNLDKH 463


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,209,001
Number of Sequences: 37544
Number of extensions: 355992
Number of successful extensions: 696
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)