SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14b06
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   4.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.6  
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    23   6.1  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    23   8.1  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    23   8.1  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 551 GIHCHICKLTFGKKKEYDEH 610
           GI C IC   F ++++Y  H
Sbjct: 380 GIKCTICHKLFSQRQDYQLH 399


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 440  HNPKI*TITMASQSNTAGPKPSQMFHIPKATT 535
            H P++   +  S S+  GP PS + H P  ++
Sbjct: 1334 HQPQLSQSSHHSSSSHGGPTPSIISHTPSLSS 1365


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 428 MFCPCMLIKQLVSWECGTCYCEHRDIIKFTATCLFVIK 315
           +FC    IK  +S +  TCY +H  I    A    +IK
Sbjct: 140 VFCIGFTIKDSMS-QRKTCYAQHSQIKNIRAKMTAIIK 176


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 57  NLCLFSIFHLECHKT 101
           N+CL ++  L CHKT
Sbjct: 227 NVCLTNLNKLACHKT 241


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 57  NLCLFSIFHLECHKT 101
           N+CL ++  L CHKT
Sbjct: 227 NVCLTNLNKLACHKT 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,306
Number of Sequences: 2352
Number of extensions: 16068
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -