BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14b06
(633 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 24 4.6
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 24 4.6
X98186-1|CAA66861.1| 269|Anopheles gambiae put. S3a ribosomal p... 23 6.1
AY146752-1|AAO12067.1| 277|Anopheles gambiae odorant-binding pr... 23 8.1
AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding pr... 23 8.1
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 23.8 bits (49), Expect = 4.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 551 GIHCHICKLTFGKKKEYDEH 610
GI C IC F ++++Y H
Sbjct: 380 GIKCTICHKLFSQRQDYQLH 399
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.8 bits (49), Expect = 4.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 440 HNPKI*TITMASQSNTAGPKPSQMFHIPKATT 535
H P++ + S S+ GP PS + H P ++
Sbjct: 1334 HQPQLSQSSHHSSSSHGGPTPSIISHTPSLSS 1365
>X98186-1|CAA66861.1| 269|Anopheles gambiae put. S3a ribosomal
protein homologue protein.
Length = 269
Score = 23.4 bits (48), Expect = 6.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 428 MFCPCMLIKQLVSWECGTCYCEHRDIIKFTATCLFVIK 315
+FC IK +S + TCY +H I A +IK
Sbjct: 140 VFCIGFTIKDSMS-QRKTCYAQHSQIKNIRAKMTAIIK 176
>AY146752-1|AAO12067.1| 277|Anopheles gambiae odorant-binding
protein AgamOBP35 protein.
Length = 277
Score = 23.0 bits (47), Expect = 8.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 57 NLCLFSIFHLECHKT 101
N+CL ++ L CHKT
Sbjct: 227 NVCLTNLNKLACHKT 241
>AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding
protein AgamOBP36 protein.
Length = 277
Score = 23.0 bits (47), Expect = 8.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 57 NLCLFSIFHLECHKT 101
N+CL ++ L CHKT
Sbjct: 227 NVCLTNLNKLACHKT 241
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,306
Number of Sequences: 2352
Number of extensions: 16068
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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