Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14b06
         (633 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032777-1|AAH32777.1|  730|Homo sapiens actin filament associat...    31   4.5  
AB209676-1|BAD92913.1|  638|Homo sapiens actin filament associat...    31   4.5  
AF188700-1|AAG17055.1|  730|Homo sapiens actin filament associat...    30   5.9  

>BC032777-1|AAH32777.1|  730|Homo sapiens actin filament associated
           protein 1 protein.
          Length = 730

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +3

Query: 435 AFITQKYKQSQWLHNLTLQDRSRAKC---STSRRPLL*IKLAGSTVTYVN*LSVKKKNMT 605
           AF+ +K +  QW   L +   ++  C   S  ++P + + L G  +TY+   S KKK+  
Sbjct: 158 AFLLRKKRFGQWTKLLCVIKDTKLLCYKSSKDQQPQMELPLQGCNITYIPKDSKKKKHEL 217

Query: 606 NIT 614
            IT
Sbjct: 218 KIT 220


>AB209676-1|BAD92913.1|  638|Homo sapiens actin filament associated
           protein variant protein.
          Length = 638

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +3

Query: 435 AFITQKYKQSQWLHNLTLQDRSRAKC---STSRRPLL*IKLAGSTVTYVN*LSVKKKNMT 605
           AF+ +K +  QW   L +   ++  C   S  ++P + + L G  +TY+   S KKK+  
Sbjct: 66  AFLLRKKRFGQWTKLLCVIKDTKLLCYKSSKDQQPQMELPLQGCNITYIPKDSKKKKHEL 125

Query: 606 NIT 614
            IT
Sbjct: 126 KIT 128


>AF188700-1|AAG17055.1|  730|Homo sapiens actin filament associated
           protein protein.
          Length = 730

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +3

Query: 435 AFITQKYKQSQWLHNLTLQDRSRAKC---STSRRPLL*IKLAGSTVTYVN*LSVKKKNMT 605
           AF+ +K +  QW   L +   ++  C   S  ++P + + L G  +TY+   S KKK+  
Sbjct: 158 AFLLRKKRFGQWTKLLCVIKDTKLLCYKSSKDQQPQMELLLQGCNITYIPKDSKKKKHEL 217

Query: 606 NIT 614
            IT
Sbjct: 218 KIT 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,995,888
Number of Sequences: 237096
Number of extensions: 2077110
Number of successful extensions: 3609
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3606
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)