Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14b01
         (735 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D31885-1|BAA06683.1|  226|Homo sapiens KIAA0069 protein.               62   2e-09
BC010281-1|AAH10281.1|  203|Homo sapiens ADP-ribosylation factor...    62   2e-09

>D31885-1|BAA06683.1|  226|Homo sapiens KIAA0069 protein.
          Length = 226

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
 Frame = +2

Query: 278 LCIFSF---VICNQLYGSSSWTGQHEKTFEEICRSIVISYNKLVIYIHSFYSLRDTSPFM 448
           LC+  +   ++  +++GS+ WT + ++ F EIC ++V +  + V +    ++L++  P M
Sbjct: 100 LCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNLVKTRRRAVGWWKRLFTLKEEKPKM 159

Query: 449 YYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQRSGIFNSFFSV 598
           Y+   I +L  VAW+   ++N+             PG+ + GI   +  +
Sbjct: 160 YFMTMIVSLAAVAWVGQQVHNLLLTYLIVTSLLLLPGLNQHGIILKYIGM 209



 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 16/52 (30%), Positives = 33/52 (63%)
 Frame = +1

Query: 160 QVRKVKRTLEGWRVALLSLKSVILWEQQWHPCAIVGSMTIMYLLICYMQPAL 315
           +   ++  L+GW   +L    V+ WE+ W P AI+G +++++L+I Y+ P++
Sbjct: 38  ETASLEEQLQGWGEVMLMADKVLRWERAWFPPAIMGVVSLVFLIIYYLDPSV 89


>BC010281-1|AAH10281.1|  203|Homo sapiens ADP-ribosylation
           factor-like 6 interacting protein 1 protein.
          Length = 203

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
 Frame = +2

Query: 278 LCIFSF---VICNQLYGSSSWTGQHEKTFEEICRSIVISYNKLVIYIHSFYSLRDTSPFM 448
           LC+  +   ++  +++GS+ WT + ++ F EIC ++V +  + V +    ++L++  P M
Sbjct: 77  LCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNLVKTRRRAVGWWKRLFTLKEEKPKM 136

Query: 449 YYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQRSGIFNSFFSV 598
           Y+   I +L  VAW+   ++N+             PG+ + GI   +  +
Sbjct: 137 YFMTMIVSLAAVAWVGQQVHNLLLTYLIVTSLLLLPGLNQHGIILKYIGM 186



 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 16/52 (30%), Positives = 33/52 (63%)
 Frame = +1

Query: 160 QVRKVKRTLEGWRVALLSLKSVILWEQQWHPCAIVGSMTIMYLLICYMQPAL 315
           +   ++  L+GW   +L    V+ WE+ W P AI+G +++++L+I Y+ P++
Sbjct: 15  ETASLEEQLQGWGEVMLMADKVLRWERAWFPPAIMGVVSLVFLIIYYLDPSV 66


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,417,797
Number of Sequences: 237096
Number of extensions: 2052342
Number of successful extensions: 7306
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7306
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)