Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14a08
         (560 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical pr...    31   0.43 
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...    30   0.99 
Z68221-6|CAB97237.1|  583|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z68217-12|CAA92468.2|  583|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z74040-1|CAA98514.2|  340|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z81570-1|CAB04606.1|  749|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U64608-2|AAB04591.1|  537|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U23516-2|AAG38882.1|  507|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U23516-1|AAL11101.1|  464|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AY887910-1|AAX34422.1|  749|Caenorhabditis elegans anion transpo...    27   9.2  

>Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical
           protein Y57G11B.5 protein.
          Length = 225

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +2

Query: 110 YTFVFLSLFLVDYLLGNGFVDMFQTIFCKIACFVKKTLREEAKKTQLV-GKENPISIPVI 286
           YT   LS   +D L G  F  + Q      +CF K    EE++K +   G    + +  I
Sbjct: 133 YTACVLSEVPMDQLQGFTFKTVLQYAKPVTSCFAKHQECEESEKAEFYKGMMASVELVDI 192

Query: 287 FIEIL--VLSLTIAFLNKY-KKYRAKDRIDEL 373
           F+ IL  V S  + F++ + KK+  KD +D L
Sbjct: 193 FVPILEAVHSGNLEFIHTFDKKFNPKD-LDNL 223


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
           protein F15E6.6 protein.
          Length = 1228

 Score = 30.3 bits (65), Expect = 0.99
 Identities = 23/78 (29%), Positives = 37/78 (47%)
 Frame = +2

Query: 251 VGKENPISIPVIFIEILVLSLTIAFLNKYKKYRAKDRIDELLNESKEAIRQTNEFLEKWR 430
           V  ENP+++    IE+L L  +I    ++KK R    I   L     A R   EF +KW 
Sbjct: 218 VDSENPVTLKGDRIELL-LPKSIEQFKEFKKDRTV--ISSGLITRFIATRNPKEFSQKWI 274

Query: 431 LRRIPTDFSYLDEEPQEI 484
             +   +F+ + E P+ +
Sbjct: 275 TTKYVKEFNEVIENPETV 292


>Z68221-6|CAB97237.1|  583|Caenorhabditis elegans Hypothetical
           protein F58G6.6 protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +2

Query: 347 RAKDRIDELLNES-KEAIRQTNEFLEKWRLRRIPTDFSYLDEEPQEIKPLKLEVPILHMA 523
           RAK+ +D L  ++ KE   + N +  ++R+R I  +   LD   +E+    L++PI    
Sbjct: 500 RAKEAMDILPAKTMKELSEECNYYQTRYRVR-IEQNKEKLDRRIEEVWKKLLKMPIESQE 558

Query: 524 IIDTLGTTRS 553
           +ID +    S
Sbjct: 559 VIDFISVAHS 568


>Z68217-12|CAA92468.2|  583|Caenorhabditis elegans Hypothetical
           protein F58G6.6 protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +2

Query: 347 RAKDRIDELLNES-KEAIRQTNEFLEKWRLRRIPTDFSYLDEEPQEIKPLKLEVPILHMA 523
           RAK+ +D L  ++ KE   + N +  ++R+R I  +   LD   +E+    L++PI    
Sbjct: 500 RAKEAMDILPAKTMKELSEECNYYQTRYRVR-IEQNKEKLDRRIEEVWKKLLKMPIESQE 558

Query: 524 IIDTLGTTRS 553
           +ID +    S
Sbjct: 559 VIDFISVAHS 568


>Z74040-1|CAA98514.2|  340|Caenorhabditis elegans Hypothetical
           protein K10D6.2a protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 218 FSSRNKLSCRISFGTYQRNHCLTNN 144
           F S +  S ++SF T +R+HC T N
Sbjct: 295 FESTHPSSIKMSFHTEERSHCSTTN 319


>Z81570-1|CAB04606.1|  749|Caenorhabditis elegans Hypothetical
           protein K12G11.1 protein.
          Length = 749

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 251 VGKENPISIPVIFIEILVLSLTIAFLNKYKKYRAKDRI 364
           + + NP+S  +  + I+VL     F+N + K + K  I
Sbjct: 285 ITRANPVSCGISIVSIIVLHFGKEFINPFIKRKTKSNI 322


>U64608-2|AAB04591.1|  537|Caenorhabditis elegans Hypothetical
           protein T22B7.4 protein.
          Length = 537

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = +2

Query: 326 LNKYKKYRAKDRIDELLNESKEAIRQTNEFLEK---WRLRRIPTDFSYLDEEPQEIKPLK 496
           +NK +K  AK    + LN+ +E + Q  E +     WR   I       D    EI  LK
Sbjct: 64  MNKREKNEAKTLYKKHLNQGQEGMNQLEELINNMKLWRANAINESREKGDLNAIEIMKLK 123

Query: 497 LE-VPILHM 520
              +PI++M
Sbjct: 124 HGCLPIINM 132


>U23516-2|AAG38882.1|  507|Caenorhabditis elegans Hypothetical
           protein B0416.5a protein.
          Length = 507

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
 Frame = +2

Query: 257 KENPISIPV--IFIEILVLSLTIAFLNKYKKYRAK-------DRIDELLNESKEAI 397
           K+N +SI +  +   +LVL+L + F   YK+  A+       D+  EL N++K+ I
Sbjct: 438 KDNTMSIMIFSLLATLLVLTLVVLFKPVYKRLEAERGNRATADKAKELSNQNKDRI 493


>U23516-1|AAL11101.1|  464|Caenorhabditis elegans Hypothetical
           protein B0416.5b protein.
          Length = 464

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
 Frame = +2

Query: 257 KENPISIPV--IFIEILVLSLTIAFLNKYKKYRAK-------DRIDELLNESKEAI 397
           K+N +SI +  +   +LVL+L + F   YK+  A+       D+  EL N++K+ I
Sbjct: 395 KDNTMSIMIFSLLATLLVLTLVVLFKPVYKRLEAERGNRATADKAKELSNQNKDRI 450


>AY887910-1|AAX34422.1|  749|Caenorhabditis elegans anion
           transporter SULP-4 protein.
          Length = 749

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 251 VGKENPISIPVIFIEILVLSLTIAFLNKYKKYRAKDRI 364
           + + NP+S  +  + I+VL     F+N + K + K  I
Sbjct: 285 ITRANPVSCGISIVSIIVLHFGKEFINPFIKRKTKSNI 322


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,178,160
Number of Sequences: 27780
Number of extensions: 277575
Number of successful extensions: 892
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)