Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14a06
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017271-1|AAH17271.1| 253|Homo sapiens metaxin 2 protein. 116 1e-25
BC088359-1|AAH88359.1| 263|Homo sapiens metaxin 2 protein. 115 1e-25
BC067831-1|AAH67831.1| 263|Homo sapiens metaxin 2 protein. 115 1e-25
AF053551-1|AAC25105.1| 263|Homo sapiens metaxin 2 protein. 115 1e-25
AC073069-1|AAX93188.1| 249|Homo sapiens unknown protein. 114 3e-25
BC011583-1|AAH11583.1| 409|Homo sapiens chromosome 6 open readi... 31 2.9
BC004869-1|AAH04869.2| 409|Homo sapiens chromosome 6 open readi... 31 2.9
AL034371-1|CAI19992.2| 409|Homo sapiens chromosome 6 open readi... 31 2.9
>BC017271-1|AAH17271.1| 253|Homo sapiens metaxin 2 protein.
Length = 253
Score = 116 bits (278), Expect = 1e-25
Identities = 57/87 (65%), Positives = 66/87 (75%)
Frame = +3
Query: 399 MAQEPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRV 578
+A EPWP+N LYQ + EQILL DNA+ LAVQAFL+MCNLP +V R NAE+MSPSG+V
Sbjct: 3 IAAEPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKV 62
Query: 579 PFIKCGAFVVSELEPIVQFAANKGVTL 659
PFI G VVSEL PIVQF KG +L
Sbjct: 63 PFIHVGNQVVSELGPIVQFVKAKGHSL 89
>BC088359-1|AAH88359.1| 263|Homo sapiens metaxin 2 protein.
Length = 263
Score = 115 bits (277), Expect = 1e-25
Identities = 57/86 (66%), Positives = 65/86 (75%)
Frame = +3
Query: 402 AQEPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVP 581
A EPWP+N LYQ + EQILL DNA+ LAVQAFL+MCNLP +V R NAE+MSPSG+VP
Sbjct: 14 AAEPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKVP 73
Query: 582 FIKCGAFVVSELEPIVQFAANKGVTL 659
FI G VVSEL PIVQF KG +L
Sbjct: 74 FIHVGNQVVSELGPIVQFVKAKGHSL 99
>BC067831-1|AAH67831.1| 263|Homo sapiens metaxin 2 protein.
Length = 263
Score = 115 bits (277), Expect = 1e-25
Identities = 57/86 (66%), Positives = 65/86 (75%)
Frame = +3
Query: 402 AQEPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVP 581
A EPWP+N LYQ + EQILL DNA+ LAVQAFL+MCNLP +V R NAE+MSPSG+VP
Sbjct: 14 AAEPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKVP 73
Query: 582 FIKCGAFVVSELEPIVQFAANKGVTL 659
FI G VVSEL PIVQF KG +L
Sbjct: 74 FIHVGNQVVSELGPIVQFVKAKGHSL 99
>AF053551-1|AAC25105.1| 263|Homo sapiens metaxin 2 protein.
Length = 263
Score = 115 bits (277), Expect = 1e-25
Identities = 57/86 (66%), Positives = 65/86 (75%)
Frame = +3
Query: 402 AQEPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVP 581
A EPWP+N LYQ + EQILL DNA+ LAVQAFL+MCNLP +V R NAE+MSPSG+VP
Sbjct: 14 AAEPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKVP 73
Query: 582 FIKCGAFVVSELEPIVQFAANKGVTL 659
FI G VVSEL PIVQF KG +L
Sbjct: 74 FIHVGNQVVSELGPIVQFVKAKGHSL 99
>AC073069-1|AAX93188.1| 249|Homo sapiens unknown protein.
Length = 249
Score = 114 bits (274), Expect = 3e-25
Identities = 56/84 (66%), Positives = 64/84 (76%)
Frame = +3
Query: 408 EPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVPFI 587
EPWP+N LYQ + EQILL DNA+ LAVQAFL+MCNLP +V R NAE+MSPSG+VPFI
Sbjct: 2 EPWPENATLYQQLKGEQILLSDNAASLAVQAFLQMCNLPIKVVCRANAEYMSPSGKVPFI 61
Query: 588 KCGAFVVSELEPIVQFAANKGVTL 659
G VVSEL PIVQF KG +L
Sbjct: 62 HVGNQVVSELGPIVQFVKAKGHSL 85
>BC011583-1|AAH11583.1| 409|Homo sapiens chromosome 6 open reading
frame 168 protein.
Length = 409
Score = 31.5 bits (68), Expect = 2.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 483 CLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVPFIKCGAFVVSELEPIVQFAANK-GVTL 659
CL ++ +L+M +LP++ + +S G++P+I+ VS E I+ F K GV L
Sbjct: 119 CLKMETYLRMADLPYQ---NYFGGKLSAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNL 175
>BC004869-1|AAH04869.2| 409|Homo sapiens chromosome 6 open reading
frame 168 protein.
Length = 409
Score = 31.5 bits (68), Expect = 2.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 483 CLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVPFIKCGAFVVSELEPIVQFAANK-GVTL 659
CL ++ +L+M +LP++ + +S G++P+I+ VS E I+ F K GV L
Sbjct: 119 CLKMETYLRMADLPYQ---NYFGGKLSAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNL 175
>AL034371-1|CAI19992.2| 409|Homo sapiens chromosome 6 open reading
frame 168 protein.
Length = 409
Score = 31.5 bits (68), Expect = 2.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 483 CLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVPFIKCGAFVVSELEPIVQFAANK-GVTL 659
CL ++ +L+M +LP++ + +S G++P+I+ VS E I+ F K GV L
Sbjct: 119 CLKMETYLRMADLPYQ---NYFGGKLSAQGKMPWIEYNHEKVSGTEFIIDFLEEKLGVNL 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,898,366
Number of Sequences: 237096
Number of extensions: 1786727
Number of successful extensions: 7398
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7398
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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