Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13p20
(685 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 99 3e-21
08_02_1483 - 27451391-27451794,27451883-27452387 36 0.030
03_01_0648 - 4749150-4749275,4749902-4749986,4750761-4750861,475... 33 0.28
03_01_0245 + 1916718-1917443,1917534-1917719 33 0.28
05_07_0249 - 28659760-28659831,28660376-28660412,28660691-28660974 31 0.85
12_02_0559 - 20462217-20462780 30 1.5
12_02_0558 - 20453998-20454561 30 1.5
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 29 2.6
03_05_0521 + 25160245-25160883 29 2.6
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 29 3.4
08_02_0570 - 18818175-18818609,18819681-18819689 29 3.4
07_03_1033 - 23417749-23418012,23418027-23418137 29 3.4
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 29 3.4
02_05_0867 - 32338313-32338331,32338372-32338496,32338972-323391... 29 3.4
11_05_0077 - 18866707-18867334,18867410-18867555 29 4.5
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 29 4.5
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 29 4.5
07_01_1131 - 10510404-10511000 29 4.5
06_03_0790 - 24636805-24637770 29 4.5
05_01_0472 + 3772633-3773145 28 6.0
01_06_1160 - 34996840-34996979,34997316-34997478,34997970-349983... 28 6.0
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 6.0
01_02_0045 - 10576475-10577198,10578347-10578504 28 6.0
06_01_1039 - 8158929-8159023,8159663-8159966 28 7.9
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 28 7.9
02_05_0393 + 28571232-28572254 28 7.9
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 99.1 bits (236), Expect = 3e-21
Identities = 51/102 (50%), Positives = 62/102 (60%)
Frame = +2
Query: 209 ENGVDPINGKELRVEDLXXXXXXXXXXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQ 388
++G P+ +EL ++D+ A SIP L Q+EWDA+ML +F QQ
Sbjct: 4 DHGKCPVTKEELTMDDIVAVKTNKVVKPRQLQAASIPGLLGMFQNEWDAIMLSSFALEQQ 63
Query: 389 LQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 514
L TARQELSHALYQHDAACRVIARL KE AR LA + Q
Sbjct: 64 LHTARQELSHALYQHDAACRVIARLKKERDEARALLAQAERQ 105
>08_02_1483 - 27451391-27451794,27451883-27452387
Length = 302
Score = 35.9 bits (79), Expect = 0.030
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 457 PTHKGGDGGARGPRHTETAGRHCSTPST--TPHGGVSRQCGSNRHVCGRGVSSAGARHRT 630
P H G GG G RH AG S+PST PHGG + GS+ GV++A A +
Sbjct: 227 PEHSSGGGGGMGGRHA-AAGEAGSSPSTAAAPHGG--GEGGSS------GVAAAAAAVSS 277
Query: 631 HAGTEAPRPHP 663
A P P P
Sbjct: 278 SAVVMDPYPTP 288
>03_01_0648 -
4749150-4749275,4749902-4749986,4750761-4750861,
4750933-4751191,4751382-4751434,4752828-4752990,
4753181-4754616
Length = 740
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 469 GGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVS 606
G GGARG H +G S+P+++ G + GS+R V GR S
Sbjct: 87 GQQGGARGAIHVPLSGGFASSPASSTSAGSAPSPGSDRFV-GRSPS 131
>03_01_0245 + 1916718-1917443,1917534-1917719
Length = 303
Score = 32.7 bits (71), Expect = 0.28
Identities = 40/147 (27%), Positives = 51/147 (34%), Gaps = 17/147 (11%)
Frame = +1
Query: 286 KAKTSKCHINPCHTEKHAR*VGRPDVTCL------HTETAVADC*TRIKSCIVP-TRRSV 444
+A+ C ++P ++HA R C+ H ++ C+ P SV
Sbjct: 3 RARGLSCLMSPLSGKRHAGDARRSSAACICCIGPHHKPSSAVGGGGGCVPCLAPHADHSV 62
Query: 445 -----SCDSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRG--- 600
SC GGD RG T T+ R TP T R CG RG
Sbjct: 63 RAPLTSCCGSGGGGGDNNLRGRSSTTTSARTPRTPKTPCTPTARRLCGVRSRTPRRGQVG 122
Query: 601 --VSSAGARHRTHAGTEAPRPHPARGT 675
SSA A RT R RGT
Sbjct: 123 CFQSSAPAAARTPRTPTTQRACYVRGT 149
>05_07_0249 - 28659760-28659831,28660376-28660412,28660691-28660974
Length = 130
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +1
Query: 436 RSVSCDSPTHKGGDGGARGPRHTETAG---RHCSTPSTTPHGGVSRQCGSN 579
R+ + P G GG G R + G R P TP GG R CG++
Sbjct: 16 RARAAGRPDLTPGGGGGSGARRSYGCGAGPRAAGWPDLTPGGGAKRSCGAD 66
>12_02_0559 - 20462217-20462780
Length = 187
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +1
Query: 466 KGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 615
+GG GG AGR T P G R+ G R GRG ++ G
Sbjct: 89 RGGGGGGDAGGGDGAAGRR--TVEAAPAAGGGRRQGRERRTAGRGAAAVG 136
>12_02_0558 - 20453998-20454561
Length = 187
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +1
Query: 466 KGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 615
+GG GG AGR T P G R+ G R GRG ++ G
Sbjct: 89 RGGGGGGDAGGGDGAAGRR--TVEAAPAAGGGRRQGRERRTAGRGAAAVG 136
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/67 (34%), Positives = 25/67 (37%)
Frame = +1
Query: 484 ARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTEAPRPHP 663
A GP H R S P GG NR G G S A + G P P+P
Sbjct: 393 AAGPGHHYAKPRGPGGSSRYPQGGNQGGGYPNRGGQGGGGSYGNAPY-PQQGRGPPPPYP 451
Query: 664 ARGTAGT 684
G AGT
Sbjct: 452 GSGMAGT 458
>03_05_0521 + 25160245-25160883
Length = 212
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/77 (29%), Positives = 27/77 (35%)
Frame = +1
Query: 439 SVSCDSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGA 618
S+SC S HKG GG G R AG G + + V G G +AG
Sbjct: 18 SISCKSTRHKGRAGG--GGRAAAVAGAREPGKGAAVVAGARERVTA---VAGAGAPAAGV 72
Query: 619 RHRTHAGTEAPRPHPAR 669
R R R R
Sbjct: 73 RERRDEAAAVARAREPR 89
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 307 GTWRFWLYYRWCFDLNKVLNSQLLAVNRIHAIFYYVLLNDSPF 179
G +RFWL + F + + +L +H FYYVL ++ +
Sbjct: 151 GHYRFWLLWNSAFRVT--YSRMMLYTTPVHGTFYYVLRYEAEY 191
>08_02_0570 - 18818175-18818609,18819681-18819689
Length = 147
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/89 (30%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Frame = +1
Query: 328 EKHAR*VGRPDV-TCLHTETAVADC*TRIKSCIVPTRRSVSCDSPTHKGGDGGARG---- 492
EKHAR G +V T + AV + + C+ R C GG G RG
Sbjct: 5 EKHARGGGAEEVATGVGEAAAVVETEEAVVGCLPGGREGSRCRGQREGGGCCGGRGGGGR 64
Query: 493 --PRHTETAGRHCSTPSTTPHGGVSRQCG 573
R R GGV RQCG
Sbjct: 65 WSSRRVGGRRRLMIDVREASLGGVGRQCG 93
>07_03_1033 - 23417749-23418012,23418027-23418137
Length = 124
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 594 TWCLVCRSAPPHSRRNGSAEAAPCPRDCWH 683
+WC R A P S NG AE + WH
Sbjct: 6 SWCGSPRKATPSSGNNGKAENGVAKLEIWH 35
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +2
Query: 101 KMSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDL 259
++ YC G+VF+ I YI + G P+ G L+ EDL
Sbjct: 36 RLPFYCCALTFLPFEDPVCTADGSVFDLMSIIPYIKKFGKHPVTGTPLKQEDL 88
>02_05_0867 -
32338313-32338331,32338372-32338496,32338972-32339186,
32340043-32340086,32340187-32340548,32341357-32341650
Length = 352
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 630 SAVARSCRRDTTSADMPVAPALPADASVGCGA 535
S+ ARS T PV+PA PA +VG GA
Sbjct: 19 SSAARSFATGATRFPSPVSPASPAPGAVGGGA 50
>11_05_0077 - 18866707-18867334,18867410-18867555
Length = 257
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +1
Query: 436 RSVSCDSPTHKGGDGGARGPR--HTETAGRHCSTPSTTPHGGVSRQCGSNR 582
R+V+ P GG GG G T G C+ P H G G+ R
Sbjct: 24 RAVAVPLPAAGGGGGGGGGEAGVRRRTRGTWCAAPDAVAHRGEDPGVGARR 74
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 408 SCLAVCNCCLC-VKACNIRASHSSCMLFSVAGIDVALG 298
S LA C CC+C +KACN + ++ V LG
Sbjct: 667 SRLADCLCCMCCIKACNKMNDQCAIVMTQVCAAFACLG 704
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 681 ASSPSGRVRPRRFRSC-VSAVARSCRRDTTSADMPVAPA-LPADASVGCGAWGAAMPACG 508
A +P+ + + RR R +SA+A + R T A + P+ P+DAS G GA CG
Sbjct: 101 AEAPAPQEQRRRARDAELSALASATRPVTARAAVFREPSPAPSDASSGAGAGCGGGAGCG 160
>07_01_1131 - 10510404-10511000
Length = 198
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 580 RHVCGRGVSSAGARHRTHAGTEAPRPHPARGTAGT 684
RH C RG +S G R + AG + A G GT
Sbjct: 122 RHCCRRGCTSGGVRGKRRAGRGRGGDYDAGGGDGT 156
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 409 IKSCIVPTRRSVSCDSPTHKGGDGGARGPRH-TETAGRHCSTPSTTPHG 552
++ IVP S H GGDG G R T T G H S+ T P G
Sbjct: 272 VRQFIVPGPSICSSHRCKH-GGDGTGNGQRKITTTGGNHGSSGVTKPKG 319
>05_01_0472 + 3772633-3773145
Length = 170
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +1
Query: 457 PTHKGGDGGARGPRHTETAGRHCSTPSTTP---HGGVSRQCGSNRHVCGRGVSSAGARHR 627
P K GG +GRH + P HGG R+ R V SS+ R R
Sbjct: 92 PDKKKKSGGGAAAATPAASGRHGKSKQAAPSSDHGGNGRR--HVRDVSSEKRSSSLHRRR 149
Query: 628 THAG--TEAPRPH 660
AG T A RPH
Sbjct: 150 MSAGSRTAAWRPH 162
>01_06_1160 -
34996840-34996979,34997316-34997478,34997970-34998388,
34998413-34998620
Length = 309
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +1
Query: 463 HKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCG--SNRHV-CGRGVSSAGARHRTH 633
H G GG+ H +A + + P VSR G S R CGRG ++A A +
Sbjct: 85 HGRGVGGSGS--HHRSASQGGGSADLPPVRAVSRTLGLRSARPAPCGRGATAARANSSPY 142
Query: 634 AGTEAPRPHPARGTAG 681
G + ARG G
Sbjct: 143 GGGRSAPAAGARGRGG 158
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 533 GVLQCRPAVSVWRGPLAPPSP 471
G+L C P VS RGP+ PP P
Sbjct: 873 GILPC-PPVSAHRGPVIPPPP 892
>01_02_0045 - 10576475-10577198,10578347-10578504
Length = 293
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 463 HKGGDGGARGPRHTETAGRHCSTPSTTPHGGV--SRQCGSNRHVCGR-GVSSAGARHRTH 633
H G GGA P T A R ++ + G + GS R SSAG +
Sbjct: 75 HGRGSGGAGSP--TLGARRGSNSGARAGEGAALGASGAGSGRQGADPVSGSSAGEQDLGS 132
Query: 634 AGTEAPRPHPARG 672
+G+ A RPHP+ G
Sbjct: 133 SGSAAGRPHPSMG 145
>06_01_1039 - 8158929-8159023,8159663-8159966
Length = 132
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = -2
Query: 684 GASSPSGRVRPRR----FRSCVSAVARSCRRDTTSADMPVAPALPADASVGCGAWGAAMP 517
G S + R R RR R A C ++ PVAP A+ + WG+ P
Sbjct: 7 GRGSGTVRSRQRRGGGALRGVGGAAMGLCATPAMASPDPVAPPDLAEVTTAARRWGSTRP 66
Query: 516 ACG 508
A G
Sbjct: 67 ATG 69
>05_03_0475 +
14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +1
Query: 436 RSVSCDSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 615
R+ S D+ + GA RH A R +TP+T GG+S +R G++ A
Sbjct: 429 RNKSTDTDAKRSLWQGAAA-RHLMAAARRDATPTTRRSGGLSSVASRSR----LGITPAA 483
Query: 616 ARHRTHAGTEAPRPHPARG 672
+ A R PA+G
Sbjct: 484 SSGDISATPTGRRSTPAKG 502
>02_05_0393 + 28571232-28572254
Length = 340
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 661 GAASALPFLRECGGALLQTRHHVRRHACC-SRTAC*RLRGVWCLGCCNAGLRF 506
GAA A+ +R+ G AL + H+R A + RL GV C+G AG RF
Sbjct: 67 GAALAVKEMRDDGAALREAGAHLRVAAAAPDHPSVVRLHGV-CVGHPVAGNRF 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,457,337
Number of Sequences: 37544
Number of extensions: 457442
Number of successful extensions: 1853
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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