Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13p20
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018698-1|AAH18698.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 219 6e-57
BC018665-1|AAH18665.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 219 6e-57
BC008719-1|AAH08719.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA pro... 219 6e-57
AJ131186-1|CAB51857.1| 504|Homo sapiens nuclear matrix protein ... 219 6e-57
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 35 0.31
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 35 0.31
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 35 0.31
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 35 0.31
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 35 0.31
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 35 0.31
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 35 0.31
AB104446-1|BAC57496.1| 493|Homo sapiens hornerin protein. 35 0.31
BC057819-1|AAH57819.1| 156|Homo sapiens chromosome 1 open readi... 34 0.54
AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor prot... 34 0.54
AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein. 34 0.54
AB032986-1|BAA86474.1| 351|Homo sapiens KIAA1160 protein protein. 33 0.72
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 1.7
BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein. 32 1.7
BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein. 32 1.7
BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein. 32 1.7
AL513303-2|CAH74050.1| 281|Homo sapiens core promoter element b... 32 1.7
AL450322-2|CAH71011.1| 281|Homo sapiens core promoter element b... 32 1.7
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 32 1.7
AK128310-1|BAC87377.1| 205|Homo sapiens protein ( Homo sapiens ... 32 2.2
D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein. 31 2.9
AL929472-10|CAH70085.1| 156|Homo sapiens chromosome 1 open read... 31 2.9
AK127381-1|BAC86950.1| 156|Homo sapiens protein ( Homo sapiens ... 31 2.9
AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain prot... 31 2.9
AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein. 31 2.9
AF533682-1|AAQ10304.1| 133|Homo sapiens IL1RAPL1-dystrophin fus... 31 3.8
U51869-2|AAB94793.1| 215|Homo sapiens Bcd orf2 protein. 31 5.0
M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein. 30 6.7
M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein. 30 6.7
AK128822-1|BAC87623.1| 555|Homo sapiens protein ( Homo sapiens ... 30 6.7
AK097414-1|BAC05041.1| 455|Homo sapiens protein ( Homo sapiens ... 30 6.7
BC101620-1|AAI01621.1| 1001|Homo sapiens ankyrin repeat domain 3... 30 8.8
BC101618-1|AAI01619.1| 1001|Homo sapiens ankyrin repeat domain 3... 30 8.8
BC040196-1|AAH40196.1| 408|Homo sapiens CLIC6 protein protein. 30 8.8
AK125088-1|BAC86048.1| 221|Homo sapiens protein ( Homo sapiens ... 30 8.8
AK091120-1|BAC03587.1| 1001|Homo sapiens protein ( Homo sapiens ... 30 8.8
AK057853-1|BAB71597.1| 320|Homo sapiens protein ( Homo sapiens ... 30 8.8
AK057320-1|BAB71425.1| 268|Homo sapiens protein ( Homo sapiens ... 30 8.8
AF491328-1|AAN70995.1| 528|Homo sapiens corneodesmosin protein. 30 8.8
AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B... 30 8.8
AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A... 30 8.8
AB103620-2|BAF31283.1| 512|Homo sapiens S protein protein. 30 8.8
>BC018698-1|AAH18698.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 219 bits (536), Expect = 6e-57
Identities = 114/201 (56%), Positives = 135/201 (67%), Gaps = 7/201 (3%)
Frame = +2
Query: 104 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 283
MSL C+ISN SP S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 284 XXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 463
SATSIPA LK++QDEWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 464 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 622
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 623 TALTQERKRRGRTLPEGLLAP 685
T LT ERK+RG+T+PE L+ P
Sbjct: 181 TVLTTERKKRGKTVPEELVKP 201
>BC018665-1|AAH18665.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 219 bits (536), Expect = 6e-57
Identities = 114/201 (56%), Positives = 135/201 (67%), Gaps = 7/201 (3%)
Frame = +2
Query: 104 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 283
MSL C+ISN SP S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 284 XXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 463
SATSIPA LK++QDEWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 464 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 622
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 623 TALTQERKRRGRTLPEGLLAP 685
T LT ERK+RG+T+PE L+ P
Sbjct: 181 TVLTTERKKRGKTVPEELVKP 201
>BC008719-1|AAH08719.1| 504|Homo sapiens PRP19/PSO4 pre-mRNA
processing factor 19 homolog (S. cerevisiae) protein.
Length = 504
Score = 219 bits (536), Expect = 6e-57
Identities = 114/201 (56%), Positives = 135/201 (67%), Gaps = 7/201 (3%)
Frame = +2
Query: 104 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 283
MSL C+ISN SP S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 284 XXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 463
SATSIPA LK++QDEWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 464 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 622
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 623 TALTQERKRRGRTLPEGLLAP 685
T LT ERK+RG+T+PE L+ P
Sbjct: 181 TVLTTERKKRGKTVPEELVKP 201
>AJ131186-1|CAB51857.1| 504|Homo sapiens nuclear matrix protein
NMP200 protein.
Length = 504
Score = 219 bits (536), Expect = 6e-57
Identities = 114/201 (56%), Positives = 135/201 (67%), Gaps = 7/201 (3%)
Frame = +2
Query: 104 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 283
MSL C+ISN SP S V+ERR+IEKYI ENG DPIN + L E L
Sbjct: 1 MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP 60
Query: 284 XXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL 463
SATSIPA LK++QDEWDA+MLH+FT RQQLQT RQELSHALYQHDAACRVIARL
Sbjct: 61 IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL 120
Query: 464 TKEVTAAREALATLKPQAGIAAPQAPHPTE-------XXXXXXXXXXXXXDVVSRLQERA 622
TKEVTAAREALATLKPQAG+ PQA ++ +++ +LQ++A
Sbjct: 121 TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA 180
Query: 623 TALTQERKRRGRTLPEGLLAP 685
T LT ERK+RG+T+PE L+ P
Sbjct: 181 TVLTTERKKRGKTVPEELVKP 201
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2480
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 427 PTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQCGSNRHVCGRG 600
P RRS SC S T ARGP + G TPS P+ G SR+ +++ RG
Sbjct: 863 PQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRG 921
Query: 601 VS 606
+S
Sbjct: 922 LS 923
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2464
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 427 PTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQCGSNRHVCGRG 600
P RRS SC S T ARGP + G TPS P+ G SR+ +++ RG
Sbjct: 863 PQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRG 921
Query: 601 VS 606
+S
Sbjct: 922 LS 923
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2448
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 427 PTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQCGSNRHVCGRG 600
P RRS SC S T ARGP + G TPS P+ G SR+ +++ RG
Sbjct: 863 PQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRG 921
Query: 601 VS 606
+S
Sbjct: 922 LS 923
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2432
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 427 PTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQCGSNRHVCGRG 600
P RRS SC S T ARGP + G TPS P+ G SR+ +++ RG
Sbjct: 863 PQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRG 921
Query: 601 VS 606
+S
Sbjct: 922 LS 923
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2416
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 427 PTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQCGSNRHVCGRG 600
P RRS SC S T ARGP + G TPS P+ G SR+ +++ RG
Sbjct: 863 PQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRG 921
Query: 601 VS 606
+S
Sbjct: 922 LS 923
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-like
1 protein protein.
Length = 2400
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 427 PTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQCGSNRHVCGRG 600
P RRS SC S T ARGP + G TPS P+ G SR+ +++ RG
Sbjct: 863 PQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRG 921
Query: 601 VS 606
+S
Sbjct: 922 LS 923
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-like
protein 1 protein.
Length = 2464
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 427 PTRRSVSCDSPTHKGGDGGARGPRHTETAGRHCS--TPSTTPHGGVSRQCGSNRHVCGRG 600
P RRS SC S T ARGP + G TPS P+ G SR+ +++ RG
Sbjct: 863 PQRRSSSCGS-TGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRG 921
Query: 601 VS 606
+S
Sbjct: 922 LS 923
>AB104446-1|BAC57496.1| 493|Homo sapiens hornerin protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.31
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H++ +PS HG G R S +H G G SS H + +G
Sbjct: 172 GSGSGQSPGHSQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 228
>BC057819-1|AAH57819.1| 156|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 156
Score = 33.9 bits (74), Expect = 0.54
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAG--TE 645
G G RGPR R +TP+ P G +RQ + R G ++A HR+ G T
Sbjct: 10 GGGCRRGPREGGAGARREATPTAAPGG--ARQAAAGRG--GAAAAAAPGHHRSLRGDVTA 65
Query: 646 APRPHPARG 672
A P P G
Sbjct: 66 AGPPAPGAG 74
>AY396741-1|AAR91619.1| 2850|Homo sapiens hornerin precursor protein.
Length = 2850
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S RH G G SS G H++ +G
Sbjct: 884 GSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSS-GFGHKSSSG 939
Score = 33.5 bits (73), Expect = 0.72
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1119 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1175
Score = 33.5 bits (73), Expect = 0.72
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1589 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1645
Score = 33.5 bits (73), Expect = 0.72
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2529 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 2585
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2059 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSG 2115
>AL589986-3|CAH70026.1| 2850|Homo sapiens hornerin protein.
Length = 2850
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S RH G G SS G H++ +G
Sbjct: 884 GSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSS-GFGHKSSSG 939
Score = 33.5 bits (73), Expect = 0.72
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1119 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1175
Score = 33.5 bits (73), Expect = 0.72
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 1589 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1645
Score = 33.5 bits (73), Expect = 0.72
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2529 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 2585
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHG-GVSRQCGSNRHVCGRGVSSAGARHRTHAG 639
G G + P H + +PS HG G R S +H G G SS H + +G
Sbjct: 2059 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSG 2115
>AB032986-1|BAA86474.1| 351|Homo sapiens KIAA1160 protein protein.
Length = 351
Score = 33.5 bits (73), Expect = 0.72
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 433 RRSVSCDSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQC 570
RR + C S T G A PR T S P+T+P G S +C
Sbjct: 300 RRLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRC 345
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 451 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 582
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 830 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 875
>BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein.
Length = 919
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 451 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 582
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 811 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 856
>BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein.
Length = 819
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 451 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 582
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 711 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 756
>BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein.
Length = 208
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 451 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 582
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 100 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 145
>AL513303-2|CAH74050.1| 281|Homo sapiens core promoter element
binding protein protein.
Length = 281
Score = 32.3 bits (70), Expect = 1.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 487 RGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHV 588
RGPR GRHC P+ G CG R +
Sbjct: 230 RGPRRAAAGGRHCIAPALEGAGPGCTGCGQGRQI 263
>AL450322-2|CAH71011.1| 281|Homo sapiens core promoter element
binding protein protein.
Length = 281
Score = 32.3 bits (70), Expect = 1.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 487 RGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHV 588
RGPR GRHC P+ G CG R +
Sbjct: 230 RGPRRAAAGGRHCIAPALEGAGPGCTGCGQGRQI 263
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 451 DSPTHKGGDGGARGP--RHTETAGRHCS--TPSTTPHGGVSRQCGSNR 582
DSP H GDGG G RH E++ RH HGG + + G NR
Sbjct: 830 DSPRH--GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENR 875
>AK128310-1|BAC87377.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ46451 fis, clone THYMU3019476. ).
Length = 205
Score = 31.9 bits (69), Expect = 2.2
Identities = 24/83 (28%), Positives = 29/83 (34%), Gaps = 1/83 (1%)
Frame = +1
Query: 436 RSVSCDSPTHKGGDGGARGPRHTE-TAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSA 612
R+ CD P+ GG G G RH AG T G+ + R G G
Sbjct: 110 RAGPCDHPSSPGGFGQTAGWRHRPGAAGLLSEQVPGTALWGIRAWGAALRRAAGGGCGPC 169
Query: 613 GARHRTHAGTEAPRPHPARGTAG 681
+ T AG P RG G
Sbjct: 170 ASPGATGAGAGPVEPGAGRGHCG 192
>D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein.
Length = 962
Score = 31.5 bits (68), Expect = 2.9
Identities = 20/70 (28%), Positives = 23/70 (32%)
Frame = +1
Query: 454 SPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTH 633
S H GG RG G S GG ++ S HV G G
Sbjct: 881 SREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQD 940
Query: 634 AGTEAPRPHP 663
G+ P PHP
Sbjct: 941 RGSRVPHPHP 950
>AL929472-10|CAH70085.1| 156|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 156
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAG--TE 645
G G RGPR R +TP+ P G +R + R G ++A HR+ G T
Sbjct: 10 GGGCRRGPREGGAGARREATPTAAPGG--ARPAAAGRG--GAAAAAAPGHHRSLRGDVTA 65
Query: 646 APRPHPARG 672
A P P G
Sbjct: 66 AGPPAPGAG 74
>AK127381-1|BAC86950.1| 156|Homo sapiens protein ( Homo sapiens
cDNA FLJ45459 fis, clone BRSTN2010416. ).
Length = 156
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +1
Query: 472 GDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAG--TE 645
G G RGPR R +TP+ P G +R + R G ++A HR+ G T
Sbjct: 10 GGGCRRGPREGGAGARREATPTAAPGG--ARPAAAGRG--GAAAAAAPGHHRSLRGDVTA 65
Query: 646 APRPHPARG 672
A P P G
Sbjct: 66 AGPPAPGAG 74
>AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain protein.
Length = 1938
Score = 31.5 bits (68), Expect = 2.9
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 338 QDEWDALMLHAFT-QRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQ 514
+DE ++H Q+ +LQT ELSH + + ++ +I++LTK A + L LK Q
Sbjct: 1266 KDEQQTQLIHDLNMQKARLQTQNGELSHRVEEKES---LISQLTKSKQALTQQLEELKRQ 1322
>AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein.
Length = 953
Score = 31.5 bits (68), Expect = 2.9
Identities = 20/70 (28%), Positives = 23/70 (32%)
Frame = +1
Query: 454 SPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTH 633
S H GG RG G S GG ++ S HV G G
Sbjct: 872 SREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQD 931
Query: 634 AGTEAPRPHP 663
G+ P PHP
Sbjct: 932 RGSRVPHPHP 941
>AF533682-1|AAQ10304.1| 133|Homo sapiens IL1RAPL1-dystrophin fusion
protein protein.
Length = 133
Score = 31.1 bits (67), Expect = 3.8
Identities = 15/66 (22%), Positives = 35/66 (53%)
Frame = +2
Query: 308 TSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAR 487
T + T++ +Q++WD + H +RQQL ++ + L + A +V+ + ++ + +
Sbjct: 61 TELTVTVERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWK 120
Query: 488 EALATL 505
E T+
Sbjct: 121 EGPYTV 126
>U51869-2|AAB94793.1| 215|Homo sapiens Bcd orf2 protein.
Length = 215
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 487 RGPRHTETAGRHCSTPSTTPHGGVSRQCGSNR 582
RGPR GRHC P+ G CG R
Sbjct: 124 RGPRRAVAGGRHCIAPALEGAGPGCTGCGQGR 155
>M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein.
Length = 1218
Score = 30.3 bits (65), Expect = 6.7
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Frame = +1
Query: 490 GPRHTETAGRHCSTPSTTP--------HG-GVSRQCGSNRH-VCGRGVSSAGARHRTHAG 639
G RHT+T+ R + S HG G + S+RH GRG +S+ R R H G
Sbjct: 1005 GTRHTQTSSRRQAASSQEQARSRAGDRHGSGHQQSADSSRHSAIGRGQASSAVRDRGHRG 1064
Query: 640 TEAPRPHPARG 672
+ + G
Sbjct: 1065 SRGSQASDQEG 1075
>M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein.
Length = 990
Score = 30.3 bits (65), Expect = 6.7
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Frame = +1
Query: 490 GPRHTETAGRHCSTPSTTP--------HG-GVSRQCGSNRH-VCGRGVSSAGARHRTHAG 639
G RHT+T+ R + S HG G + S+RH GRG +S+ R R H G
Sbjct: 783 GTRHTQTSSRRQAASSQEQARSRAGDRHGSGHQQSADSSRHSAIGRGQASSAVRDRGHRG 842
Query: 640 TEAPRPHPARG 672
+ + G
Sbjct: 843 SRGSQASDQEG 853
>AK128822-1|BAC87623.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ46108 fis, clone TESTI2030519. ).
Length = 555
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +1
Query: 469 GGDGGARGPRHTET-AGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTE 645
G G GP + AG P GG R+CG R CG G R R G E
Sbjct: 297 GAGGEDVGPGGEDVGAGGEDVGPGGEDAGGRRRRCGGRRRRCGARRRRCGGRRRRCGGQE 356
>AK097414-1|BAC05041.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ40095 fis, clone TESTI2003940, weakly similar to
EBNA-1 NUCLEAR PROTEIN. ).
Length = 455
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +1
Query: 469 GGDGGARGPRHTET-AGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTE 645
G G GP + AG P GG R+CG R CG G R R G E
Sbjct: 294 GAGGEDVGPGGEDVGAGGEDVGPGGEDAGGRRRRCGGRRRRCGARRRRCGGRRRRCGGQE 353
>BC101620-1|AAI01621.1| 1001|Homo sapiens ankyrin repeat domain 35
protein.
Length = 1001
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 386 QLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIAAPQA 538
Q Q QEL L +++ ACR + RL + V R L QA QA
Sbjct: 845 QAQAWGQELKALLEKYNTACREVGRLREAVAEERRRSGDLAAQAAEQERQA 895
>BC101618-1|AAI01619.1| 1001|Homo sapiens ankyrin repeat domain 35
protein.
Length = 1001
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 386 QLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIAAPQA 538
Q Q QEL L +++ ACR + RL + V R L QA QA
Sbjct: 845 QAQAWGQELKALLEKYNTACREVGRLREAVAEERRRSGDLAAQAAEQERQA 895
>BC040196-1|AAH40196.1| 408|Homo sapiens CLIC6 protein protein.
Length = 408
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 490 GPRHTETAGRHCSTPSTTPHGGVSR 564
GPR E AG +P ++PHG SR
Sbjct: 102 GPREEEAAGGEEESPDSSPHGEASR 126
>AK125088-1|BAC86048.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ43098 fis, clone CTONG1000488. ).
Length = 221
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 571 GSNRHVCGRGVSSAGARHRTHAGTEAPRP 657
G R CG S A ARHR H+ T P P
Sbjct: 182 GPGRPHCGSCSSPAAARHRVHSLTHLPPP 210
>AK091120-1|BAC03587.1| 1001|Homo sapiens protein ( Homo sapiens
cDNA FLJ33801 fis, clone CTONG2000411. ).
Length = 1001
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 386 QLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIAAPQA 538
Q Q QEL L +++ ACR + RL + V R L QA QA
Sbjct: 845 QAQAWGQELKALLEKYNTACREVGRLREAVAEERRRSGDLAAQAAEQERQA 895
>AK057853-1|BAB71597.1| 320|Homo sapiens protein ( Homo sapiens
cDNA FLJ25124 fis, clone CBR06414. ).
Length = 320
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 386 QLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIAAPQA 538
Q Q QEL L +++ ACR + RL + V R L QA QA
Sbjct: 164 QAQAWGQELKALLEKYNTACREVGRLREAVAEERRRSGDLAAQAAEQERQA 214
>AK057320-1|BAB71425.1| 268|Homo sapiens protein ( Homo sapiens
cDNA FLJ32758 fis, clone TESTI2001792. ).
Length = 268
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Frame = +1
Query: 412 KSCIVPTRRSVSCDSPTHKGGDGGARGPRHT---------ETAGRHCSTPSTTPHGGVSR 564
K C+ R + + ++ + +G +R RH ETAG HC P ++
Sbjct: 136 KRCVCGPRAAGNAEAGSQEGSVSPSRPCRHLQARSPNPACETAGIHCFKPIRLESFVLAA 195
Query: 565 QCGSNRHVCGRGVSSAGARHRTHAGTEA 648
S+ G SAG R H GT A
Sbjct: 196 PKASHSSALSTGSVSAGKVGRPHRGTAA 223
>AF491328-1|AAN70995.1| 528|Homo sapiens corneodesmosin protein.
Length = 528
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +1
Query: 424 VPTRRSVSCDS--PTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQ-CGSNRHVCG 594
VP+ S+S S P H G ++ P G S+ S+ G + Q CGS + G
Sbjct: 397 VPSSSSISSSSGLPYHPCGSA-SQSPCSPPGTGSFSSSSSSQSSGKIILQPCGSKSNSSG 455
Query: 595 RGVSSAGARHRTHAGTEAPRPHPARG 672
S + T +P P P+ G
Sbjct: 456 HPCMSVSSLTLTGGPDGSPHPDPSAG 481
>AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B
protein.
Length = 704
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 490 GPRHTETAGRHCSTPSTTPHGGVSR 564
GPR E AG +P ++PHG SR
Sbjct: 380 GPREEEAAGGEEESPDSSPHGEASR 404
>AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A
protein.
Length = 686
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 490 GPRHTETAGRHCSTPSTTPHGGVSR 564
GPR E AG +P ++PHG SR
Sbjct: 380 GPREEEAAGGEEESPDSSPHGEASR 404
>AB103620-2|BAF31283.1| 512|Homo sapiens S protein protein.
Length = 512
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +1
Query: 424 VPTRRSVSCDS--PTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQ-CGSNRHVCG 594
VP+ S+S S P H G ++ P G S+ S+ G + Q CGS + G
Sbjct: 381 VPSSSSISSSSGLPYHPCGSA-SQSPCSPPGTGSFSSSSSSQSSGKIILQPCGSKSNSSG 439
Query: 595 RGVSSAGARHRTHAGTEAPRPHPARG 672
S + T +P P P+ G
Sbjct: 440 HPCMSVSSLTLTGGPDGSPHPDPSAG 465
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,574,120
Number of Sequences: 237096
Number of extensions: 2367375
Number of successful extensions: 8670
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 7554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8639
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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