Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13p20
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...   169   2e-42
U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U58746-5|AAB00625.1|  310|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical ...    29   4.1  
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass...    28   7.1  
Z93393-15|CAE54926.1|  347|Caenorhabditis elegans Hypothetical p...    27   9.4  
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score =  169 bits (410), Expect = 2e-42
 Identities = 91/192 (47%), Positives = 118/192 (61%), Gaps = 1/192 (0%)
 Frame = +2

Query: 104 MSLYCAISNXXXXXXXXSPTSGAVFERRIIEKYIIENGVDPINGKELRVEDLXXXXXXXX 283
           MS  C IS         S  SG +F+RR+I K+I ENG DPI+  EL  + L        
Sbjct: 1   MSFVCGISGELTEDPVVSQVSGHIFDRRLIVKFIAENGTDPISHGELSEDQLVSLKSGGT 60

Query: 284 XXXXXX-SATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIAR 460
                  S TSIP+ LK +QDEWD +ML++F+ RQQLQ ARQELSH+LYQHDAACRVI+R
Sbjct: 61  GSAPRNVSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISR 120

Query: 461 LTKEVTAAREALATLKPQAGIAAPQAPHPTEXXXXXXXXXXXXXDVVSRLQERATALTQE 640
           L+KE+TAAREAL+TLKP             E              ++++L+E++ +LT E
Sbjct: 121 LSKELTAAREALSTLKPHTSAKVDDDVSIDESEDQQGLSEA----ILAKLEEKSKSLTAE 176

Query: 641 RKRRGRTLPEGL 676
           RK+RG+ LPEGL
Sbjct: 177 RKQRGKNLPEGL 188


>U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical
           protein T10E9.4 protein.
          Length = 649

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
 Frame = +1

Query: 448 CDSPTHKGGDGGAR---GPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVC 591
           CD  T++ G  G R   G   TE  G  CS+      G V      N+HVC
Sbjct: 489 CDPDTNRVGILGKRHLTGEERTEVKGSACSSNKDCKSGTVCVYVNINKHVC 539


>U58746-5|AAB00625.1|  310|Caenorhabditis elegans Hypothetical
           protein R05G6.4 protein.
          Length = 310

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 164 SGAVFERRIIEKYIIENGVDPINGKELRVEDL 259
           S +V +  ++EK I  +G+DPING+ +  +D+
Sbjct: 251 SKSVVKYDVVEKLIKGDGIDPINGEPMSEDDI 282


>AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical
           protein Y62H9A.1 protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -2

Query: 276 GVLISIRSSTLNSLPLIGSTPFSIMYFSMILLSNT 172
           GVL+ I ++T  +L L+  TPF    F+M++L+ T
Sbjct: 264 GVLVGIPAATAMALLLMQYTPFEGFPFAMVVLAPT 298


>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 213 protein.
          Length = 1437

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 304 TWRFWLYYRWCFDLNKVLNSQLLAVNRIHAIFYYVL 197
           +WR+W+Y +W  + ++     ++   +IH    YVL
Sbjct: 500 SWRYWMYSKWNLETSRHPEMHIMK-GKIHGRTKYVL 534


>Z93393-15|CAE54926.1|  347|Caenorhabditis elegans Hypothetical
           protein Y48E1B.16 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 491 ALATLKPQAGIAAPQAPHPT 550
           A A  +PQ G+ AP+AP PT
Sbjct: 106 APAPTRPQYGVPAPRAPQPT 125


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 20/71 (28%), Positives = 27/71 (38%)
 Frame = +1

Query: 466 KGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAGARHRTHAGTE 645
           K G+ G +G   T     H + P T    G     G + + C         R    +GT 
Sbjct: 233 KDGEEGPQGAPGTPGNAGHDAFPGTPGQAGKPGAPGKDANYCPCP-QRQDDRTPPSSGTS 291

Query: 646 APRPHPARGTA 678
           AP+P P   TA
Sbjct: 292 APQPPPRGSTA 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,486,339
Number of Sequences: 27780
Number of extensions: 357387
Number of successful extensions: 1170
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)