Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13p15
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 33 0.32
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 31 0.98
12_01_0209 - 1583401-1583498,1583879-1583922,1584285-1584373,158... 31 0.98
11_01_0208 - 1628020-1628117,1628282-1628325,1628790-1628878,162... 31 0.98
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239... 30 1.7
11_01_0209 - 1642473-1642579,1642783-1642826,1642935-1643023,164... 30 1.7
09_02_0469 - 9610883-9611338,9611749-9611871,9612199-9612375,961... 28 9.1
08_02_0490 - 17724878-17725045,17725264-17725342,17725434-177254... 28 9.1
04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784 28 9.1
04_01_0422 + 5573833-5574647,5575577-5575692,5576922-5577130,557... 28 9.1
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 28 9.1
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 28 9.1
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 405 IIYGLIADRFGRKIPIIINVISEITLGAVLMFCDSKLWSFL 527
+I+G++AD++GRK PIII + I + L S W L
Sbjct: 154 VIWGIVADKYGRK-PIIIITLISIIIFNTLFGLSSSYWMAL 193
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 405 IIYGLIADRFGRKIPIIINVISEITLGAVLMFCDSKLWSFL 527
I +G++ADR GRK P+I+ I + + L +K W L
Sbjct: 104 IFWGVVADRIGRK-PVIVFSILSVVIFNTLFGLSTKYWMAL 143
>12_01_0209 -
1583401-1583498,1583879-1583922,1584285-1584373,
1584911-1585018,1585158-1585243,1585385-1585472,
1585970-1586140,1586379-1586454,1586534-1586583,
1586692-1586754,1586839-1586892,1587038-1587140,
1587265-1587367,1587479-1587569,1587629-1587669,
1587801-1587879
Length = 447
Score = 31.1 bits (67), Expect = 0.98
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +3
Query: 405 IIYGLIADRFGRKIPIIINVISEITLGAVLMFCDSKLW-----SFLFVFLKSLFASANIY 569
I++G++ADR GRK II ++ + I L L K W FL L L A Y
Sbjct: 83 ILWGMVADRIGRKPVIIFSIFAVIVLN-TLFGLSVKYWMAVTTRFLLGALNGLLAPIKAY 141
>11_01_0208 -
1628020-1628117,1628282-1628325,1628790-1628878,
1628986-1629030,1629397-1629504,1629650-1629735,
1629870-1629957,1630275-1630445,1630718-1630793,
1630877-1630926,1631035-1631097,1631201-1631254,
1631398-1631500,1631626-1631728,1632038-1632098,
1632186-1632226,1632375-1632453
Length = 452
Score = 31.1 bits (67), Expect = 0.98
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +3
Query: 405 IIYGLIADRFGRKIPIIINVISEITLGAVLMFCDSKLW-----SFLFVFLKSLFASANIY 569
I++G++ADR GRK II ++ + I L L K W FL L L A Y
Sbjct: 73 ILWGMVADRIGRKPVIIFSIFAVIVLN-TLFGLSVKYWMAVTTRFLLGALNGLLAPIKAY 131
>11_01_0319 -
2396835-2396951,2397035-2397105,2397219-2397297,
2397417-2397458,2397670-2397723,2397836-2397868,
2397959-2398039,2398144-2398230,2398313-2398388,
2398633-2398808,2398912-2399034,2399249-2399361,
2399521-2399632,2400054-2400273,2401986-2402314,
2402408-2402713,2403580-2403878,2404079-2404181,
2404266-2404369,2404840-2404906,2404911-2405076,
2405241-2405956
Length = 1157
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 399 GCIIYGLIADRFGRKIPIIINVISEITLGAVLMFCDSKLWSFLFVFLKSL 548
G + G +AD +GRK +++ + I VL SK+ ++F+ L++L
Sbjct: 779 GYTLMGQLADEYGRKPLLLLTASTSIIPYGVLACNKSKIAVYIFLILRTL 828
>11_01_0209 -
1642473-1642579,1642783-1642826,1642935-1643023,
1643114-1643158,1643484-1643591,1643691-1643776,
1643917-1644004,1644211-1644387,1644720-1644795,
1644898-1644947,1645030-1645092,1645332-1645434,
1645513-1645615,1645731-1645791,1646268-1646308,
1646792-1646825
Length = 424
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 405 IIYGLIADRFGRKIPIIINVISEITLGAVLMFCDSKLWSFL 527
I +G++ADR GRK P+I+ I + + L +K W L
Sbjct: 58 IFWGVVADRIGRK-PVIMFSILSVVIFNTLFGLSTKYWMAL 97
>09_02_0469 -
9610883-9611338,9611749-9611871,9612199-9612375,
9614416-9614501,9615519-9615678,9616122-9617438,
9619463-9620428,9621452-9621766
Length = 1199
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 192 LCVTDKIGVYNNTLCSVTYFNNKTEILKCKEWQIKVMGFINLEK 323
+ + +G +L + N TE+ + W MG INLEK
Sbjct: 195 ISIVGPVGFGKTSLAQFVFNNTGTEVFSFRIWVHVSMGNINLEK 238
>08_02_0490 -
17724878-17725045,17725264-17725342,17725434-17725498,
17725569-17725657,17725750-17725858,17725969-17726047,
17727247-17727512
Length = 284
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 388 PKRLNKAAEISVNL*SQKINHVFSRLIKPITLICHSLHFNISVLLL 251
PK +NKA + V + + LIK L+ H+LH ++ VLLL
Sbjct: 146 PKHMNKAKDFWV------VQKDVAELIKGRILVGHALHHDLKVLLL 185
>04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784
Length = 1035
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/69 (26%), Positives = 37/69 (53%)
Frame = +3
Query: 510 KLWSFLFVFLKSLFASANIYLSLVTVCEIASNEWRSRLCFIVAMPRLLAYVYMVPLTNNL 689
K +S+L F S +A+ S+ + + + + + PRL ++++PL+NNL
Sbjct: 823 KAFSWLETFWASHLQTAHCIWSMEVKHVNVDSFKKLQYIHLDSCPRL---IHVLPLSNNL 879
Query: 690 PNIETHSLI 716
P++ET ++
Sbjct: 880 PSLETIQIL 888
>04_01_0422 + 5573833-5574647,5575577-5575692,5576922-5577130,
5579676-5579795,5581616-5581744,5581828-5581953,
5582945-5583000,5583084-5583183,5585155-5585272,
5585374-5585583,5585902-5586226,5587094-5587187,
5588021-5588129,5588246-5588514,5589153-5589280,
5589983-5590217,5590858-5591046,5591326-5591609,
5591698-5591890,5592040-5592207,5592429-5592514,
5594391-5594550
Length = 1412
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 551 CKRQYLLKFSYCLRNCK 601
CKR YL FS L+NC+
Sbjct: 1254 CKRDYLFPFSLLLQNCR 1270
>01_06_1123 +
34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 392 SAWMHNLWFNCR*IWKKNSNNHKCNIRDYTWSGAY 496
SAW N +N W NSNN +WSG+Y
Sbjct: 797 SAWSSNSSYNSNSAWSNNSNN--------SWSGSY 823
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 411 YGLIADRFGRKIPIIINVISEITLGAV 491
+G+ AD++GRK I+I+++S I +
Sbjct: 104 WGIFADKYGRKPCIVISILSVIVFNTL 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,206,081
Number of Sequences: 37544
Number of extensions: 382341
Number of successful extensions: 684
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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