Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13p14
         (397 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060468-1|AAL25507.1|  119|Drosophila melanogaster SD05282p pro...    28   3.9  
AE013599-3898|AAF47226.2|  156|Drosophila melanogaster CG13586-P...    28   3.9  
AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA ...    28   5.2  
AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB...    27   6.8  
AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA...    27   6.8  

>AY060468-1|AAL25507.1|  119|Drosophila melanogaster SD05282p
           protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +2

Query: 2   IPLFA*IGRQMLIRERHFLFLLLIYVDCHIVGDKAHLTELKKICEHAYGCFHDTII--VC 175
           IP+FA +     + +R   F L    +C  + +K     L +ICE  Y  F +T I  +C
Sbjct: 17  IPIFAALPHNHNLSKRSNFFDL----ECKGIFNKTMFFRLDRICEDCYQLFRETSIHRLC 72

Query: 176 GKSVNEARTF 205
            K   +++ F
Sbjct: 73  KKDCFDSKWF 82


>AE013599-3898|AAF47226.2|  156|Drosophila melanogaster CG13586-PA,
           isoform A protein.
          Length = 156

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +2

Query: 2   IPLFA*IGRQMLIRERHFLFLLLIYVDCHIVGDKAHLTELKKICEHAYGCFHDTII--VC 175
           IP+FA +     + +R   F L    +C  + +K     L +ICE  Y  F +T I  +C
Sbjct: 54  IPIFAALPHNHNLSKRSNFFDL----ECKGIFNKTMFFRLDRICEDCYQLFRETSIHRLC 109

Query: 176 GKSVNEARTF 205
            K   +++ F
Sbjct: 110 KKDCFDSKWF 119


>AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA
           protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 170 VCGKSVNEARTFLDLCDLYEYS 235
           VCG    ++RTF ++C+L E+S
Sbjct: 296 VCGNLRGQSRTFSNVCELMEFS 317


>AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB,
           isoform B protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2

Query: 65  LLIYVDCHIVGDKAHLTELKKICEHAYGCFHDTII 169
           LL Y D HI+  +    +L+K+ EH Y CF  +++
Sbjct: 3   LLAYRDKHILSAQ----QLRKLSEHKYSCFSVSLL 33


>AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA,
           isoform A protein.
          Length = 417

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2

Query: 65  LLIYVDCHIVGDKAHLTELKKICEHAYGCFHDTII 169
           LL Y D HI+  +    +L+K+ EH Y CF  +++
Sbjct: 3   LLAYRDKHILSAQ----QLRKLSEHKYSCFSVSLL 33


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,921,927
Number of Sequences: 53049
Number of extensions: 336451
Number of successful extensions: 1312
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)