Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13p12
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC037798-1|AAH37798.1|  176|Homo sapiens TPPP3 protein protein.        38   0.046
BC000691-1|AAH00691.1|  176|Homo sapiens brain specific protein ...    38   0.046
AF132972-1|AAD27747.1|  176|Homo sapiens CGI-38 protein protein.       38   0.046
BC038970-1|AAH38970.1|  170|Homo sapiens tubulin polymerization-...    31   4.0  
AY173946-1|AAO49716.1|  170|Homo sapiens brain-specific protein ...    31   4.0  
AY072034-1|AAL62338.1|  170|Homo sapiens p25 beta protein.             31   4.0  
Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein.                 31   5.3  
M36769-1|AAC17185.1| 1937|Homo sapiens perinatal myosin heavy ch...    31   5.3  
BC126409-1|AAI26410.1| 1941|Homo sapiens myosin, heavy chain 2, ...    31   5.3  
BC093082-1|AAH93082.1|  708|Homo sapiens MYH2 protein protein.         31   5.3  
AF111784-1|AAD29950.1| 1941|Homo sapiens myosin heavy chain IIa ...    31   5.3  
AF111783-1|AAD29949.1| 1939|Homo sapiens myosin heavy chain IIb ...    31   5.3  

>BC037798-1|AAH37798.1|  176|Homo sapiens TPPP3 protein protein.
          Length = 176

 Score = 37.5 bits (83), Expect = 0.046
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +2

Query: 578 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKL 703
           GDPK+ G+ +      K  K  KV DGK +T TD  I F K+
Sbjct: 21  GDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKV 62


>BC000691-1|AAH00691.1|  176|Homo sapiens brain specific protein
           protein.
          Length = 176

 Score = 37.5 bits (83), Expect = 0.046
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +2

Query: 578 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKL 703
           GDPK+ G+ +      K  K  KV DGK +T TD  I F K+
Sbjct: 21  GDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKV 62


>AF132972-1|AAD27747.1|  176|Homo sapiens CGI-38 protein protein.
          Length = 176

 Score = 37.5 bits (83), Expect = 0.046
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +2

Query: 578 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKL 703
           GDPK+ G+ +      K  K  KV DGK +T TD  I F K+
Sbjct: 21  GDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKV 62


>BC038970-1|AAH38970.1|  170|Homo sapiens tubulin
           polymerization-promoting protein family member 2
           protein.
          Length = 170

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 578 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKL 703
           G+  S G  +      K  K   ++DGK +T+TD  I F K+
Sbjct: 16  GESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKV 57


>AY173946-1|AAO49716.1|  170|Homo sapiens brain-specific protein
           p25-like protein protein.
          Length = 170

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 578 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKL 703
           G+  S G  +      K  K   ++DGK +T+TD  I F K+
Sbjct: 16  GESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKV 57


>AY072034-1|AAL62338.1|  170|Homo sapiens p25 beta protein.
          Length = 170

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 578 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKL 703
           G+  S G  +      K  K   ++DGK +T+TD  I F K+
Sbjct: 16  GESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKV 57


>Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein.
          Length = 1937

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 200 EKVRFAHLTGVVKHWSSFRRASIKQQGKATAGSISAATKSASLKRLSATDSL 355
           EKV    LTG V H+ + +    +++ +A       A K+A L+ L++ D L
Sbjct: 348 EKVSIYKLTGAVMHYGNMKFKQKQREEQAEPDGTEVADKAAYLQSLNSADLL 399


>M36769-1|AAC17185.1| 1937|Homo sapiens perinatal myosin heavy chain
           protein.
          Length = 1937

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 200 EKVRFAHLTGVVKHWSSFRRASIKQQGKATAGSISAATKSASLKRLSATDSL 355
           EKV    LTG V H+ + +    +++ +A       A K+A L+ L++ D L
Sbjct: 348 EKVSIYKLTGAVMHYGNMKFKQKQREEQAEPDGTEVADKAAYLQSLNSADLL 399


>BC126409-1|AAI26410.1| 1941|Homo sapiens myosin, heavy chain 2,
           skeletal muscle, adult protein.
          Length = 1941

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 200 EKVRFAHLTGVVKHWSSFRRASIKQQGKATAGSISAATKSASLKRLSATDSL 355
           EKV    LTG V H+ + +    +++ +A       A K+A L+ L++ D L
Sbjct: 348 EKVSIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLQSLNSADLL 399


>BC093082-1|AAH93082.1|  708|Homo sapiens MYH2 protein protein.
          Length = 708

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 200 EKVRFAHLTGVVKHWSSFRRASIKQQGKATAGSISAATKSASLKRLSATDSL 355
           EKV    LTG V H+ + +    +++ +A       A K+A L+ L++ D L
Sbjct: 348 EKVSIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLQSLNSADLL 399


>AF111784-1|AAD29950.1| 1941|Homo sapiens myosin heavy chain IIa
           protein.
          Length = 1941

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 200 EKVRFAHLTGVVKHWSSFRRASIKQQGKATAGSISAATKSASLKRLSATDSL 355
           EKV    LTG V H+ + +    +++ +A       A K+A L+ L++ D L
Sbjct: 348 EKVSIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLQSLNSADLL 399


>AF111783-1|AAD29949.1| 1939|Homo sapiens myosin heavy chain IIb
           protein.
          Length = 1939

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 191 TVFEKVRFAHLTGVVKHWSSFRRASIKQQGKATAGSISAATKSASLKRLSATDSL 355
           T  EKV    LTG V H+ + +    +++ +A       A K+A L  L++ D L
Sbjct: 345 TADEKVAIYKLTGAVMHYGNMKFKQKQREEQAEPDGTEVADKAAYLTSLNSADLL 399


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,578,255
Number of Sequences: 237096
Number of extensions: 1648712
Number of successful extensions: 7285
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7285
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)