Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13p07
         (664 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    26   0.37 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.9  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +3

Query: 378 FKDQFESDQEDQSAIDDETNELKSNVPQLSSNFKSKTVRFKPLVKKKDEPSPADLGPVVN 557
           F   F SD++ Q+AI       K+NVP     +  KT  F  ++  +++  P+ L  + N
Sbjct: 41  FDYNFGSDEKRQAAIQSGEYNYKNNVPIDVDRWNGKT--FVTIL--RNDGVPSSLNVISN 96

Query: 558 KM 563
           K+
Sbjct: 97  KI 98


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 219 DKQHYFQSSQNLYAKSDLLVQALFQ 145
           D   YF  + NLY +   LVQ L Q
Sbjct: 881 DSGAYFCQASNLYGRDQQLVQLLVQ 905


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 219 DKQHYFQSSQNLYAKSDLLVQALFQ 145
           D   YF  + NLY +   LVQ L Q
Sbjct: 877 DSGAYFCQASNLYGRDQQLVQLLVQ 901


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 579 PLQQMAPFFSSEGRFMPWRNWISIFGNV 662
           PL +M P+F      +   N   IFG +
Sbjct: 161 PLYEMCPYFFFNSEVLQKANHALIFGKL 188


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 579 PLQQMAPFFSSEGRFMPWRNWISIFGNV 662
           PL +M P+F      +   N   IFG +
Sbjct: 161 PLYEMCPYFFFNSEVLQKANHALIFGKL 188


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 615 GRFMPWRNWISIFG 656
           G+ +P  NW+ +FG
Sbjct: 156 GKRVPPTNWVGVFG 169


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 615 GRFMPWRNWISIFG 656
           G+ +P  NW+ +FG
Sbjct: 156 GKRVPPTNWVGVFG 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,747
Number of Sequences: 438
Number of extensions: 4362
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)