Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13p06
(464 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542121-1|CAG46918.1| 105|Homo sapiens NDUFB2 protein. 66 4e-11
AF050639-1|AAD05428.1| 105|Homo sapiens NADH-ubiquinone oxidore... 66 4e-11
BC063026-1|AAH63026.1| 95|Homo sapiens NDUFB2 protein protein. 64 2e-10
AC006344-2|AAD43191.1| 95|Homo sapiens NADH-ubiquinone oxidore... 64 2e-10
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 31 1.5
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 31 1.5
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 31 1.5
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 31 1.5
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 31 1.5
D31765-1|BAA06543.1| 903|Homo sapiens KIAA0061 protein. 31 2.6
BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein. 31 2.6
BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and tetratri... 31 2.6
BC011529-1|AAH11529.1| 1024|Homo sapiens processing of precursor... 31 2.6
AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein. 31 2.6
AK127248-1|BAC86899.1| 596|Homo sapiens protein ( Homo sapiens ... 31 2.6
AB075865-1|BAB85571.1| 955|Homo sapiens KIAA1985 protein protein. 31 2.6
AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein. 25 5.5
AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein. 25 5.5
AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein. 25 5.5
AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein. 25 5.5
AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and sc... 25 5.5
BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein. 25 5.5
AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens ... 25 5.6
BX537611-1|CAD97798.1| 657|Homo sapiens hypothetical protein pr... 25 5.8
AK057830-1|BAB71591.1| 165|Homo sapiens protein ( Homo sapiens ... 29 6.0
AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein. 29 7.9
>CR542121-1|CAG46918.1| 105|Homo sapiens NDUFB2 protein.
Length = 105
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +2
Query: 149 RNAGHGVWT---YRVPPPMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPS 319
R+AG GV YR P + ++ + ++ GL W+WIL+ + E + G +PY DPS
Sbjct: 32 RHAGGGVHIEPRYRQFPQL-TRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPS 90
Query: 320 TWTDEELGIPPD 355
WTDEELGIPPD
Sbjct: 91 QWTDEELGIPPD 102
>AF050639-1|AAD05428.1| 105|Homo sapiens NADH-ubiquinone
oxidoreductase AGGG subunit protein.
Length = 105
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +2
Query: 149 RNAGHGVWT---YRVPPPMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPS 319
R+AG GV YR P + ++ + ++ GL W+WIL+ + E + G +PY DPS
Sbjct: 32 RHAGGGVHIEPRYRQFPQL-TRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPS 90
Query: 320 TWTDEELGIPPD 355
WTDEELGIPPD
Sbjct: 91 QWTDEELGIPPD 102
>BC063026-1|AAH63026.1| 95|Homo sapiens NDUFB2 protein protein.
Length = 95
Score = 64.5 bits (150), Expect = 2e-10
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 191 PMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPSTWTDEELGIPPD 355
P ++ + ++ GL W+WIL+ + E + G +PY DPS WTDEELGIPPD
Sbjct: 38 PQLTRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPSQWTDEELGIPPD 92
>AC006344-2|AAD43191.1| 95|Homo sapiens NADH-ubiquinone
oxidoreductase AGGG subunit protein.
Length = 95
Score = 64.5 bits (150), Expect = 2e-10
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 191 PMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPSTWTDEELGIPPD 355
P ++ + ++ GL W+WIL+ + E + G +PY DPS WTDEELGIPPD
Sbjct: 38 PQLTRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPSQWTDEELGIPPD 92
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 370
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 370
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 370
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 370
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 370
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>D31765-1|BAA06543.1| 903|Homo sapiens KIAA0061 protein.
Length = 903
Score = 30.7 bits (66), Expect = 2.6
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = -2
Query: 334 FISPCTGINIRPLTSYMLRF------SCNVIQNPPPAQSTKPLS*PNRFFGRHWWRYTV- 176
+ISP TGI I LT M RF S +++ A S + WW T
Sbjct: 292 WISPTTGIIISDLTMEMNRFRLIGPLSHSILTEAIKAASVHTVGEDTEETPHRWWIETCK 351
Query: 175 RPNSMS--CISFGLFQAVASILQPTE 104
+P+S+S C +F+ + I P E
Sbjct: 352 KPDSVSLHCRQEAIFELLGGITSPAE 377
>BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein.
Length = 1281
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 317 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 156
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 883 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 933
>BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and
tetratricopeptide repeats 2 protein.
Length = 1288
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 317 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 156
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 890 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 940
>BC011529-1|AAH11529.1| 1024|Homo sapiens processing of precursor 1,
ribonuclease P/MRP subunit (S. cerevisiae) protein.
Length = 1024
Score = 30.7 bits (66), Expect = 2.6
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Frame = -2
Query: 334 FISPCTGINIRPLTSYMLRF------SCNVIQNPPPAQSTKPLS*PNRFFGRHWWRYTV- 176
+ISP TGI I LT M RF S +++ A S + WW T
Sbjct: 413 WISPTTGIIISDLTMEMNRFRLIGPLSHSILTEAIKAASVHTVGEDTEETPHRWWIETCK 472
Query: 175 RPNSMS--CISFGLFQAVASILQPTE 104
+P+S+S C +F+ + I P E
Sbjct: 473 KPDSVSLHCRQEAIFELLGGITSPAE 498
>AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein.
Length = 1288
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 317 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 156
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 890 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 940
>AK127248-1|BAC86899.1| 596|Homo sapiens protein ( Homo sapiens
cDNA FLJ45315 fis, clone BRHIP3005231. ).
Length = 596
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 317 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 156
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 437 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 487
>AB075865-1|BAB85571.1| 955|Homo sapiens KIAA1985 protein protein.
Length = 955
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 317 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 156
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 557 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 607
>AB018333-1|BAA34510.1| 1319|Homo sapiens KIAA0790 protein protein.
Length = 1319
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +2
Query: 185 PPPMPSKKS-IRLAQGL 232
PPP+P+KKS RLA GL
Sbjct: 1056 PPPVPAKKSRERLANGL 1072
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCIKH*CKSILVIVQRMSC 418
A P ++G+ P PST L P++ +H K + +++SC
Sbjct: 1110 ALAPRPLSGQAPGSPPSTRPPPWLSELPENTSLQEHGVKLGPALTRKVSC 1159
>AY351979-1|AAQ55463.1| 1247|Homo sapiens PEPE1 protein.
Length = 1247
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +2
Query: 185 PPPMPSKKS-IRLAQGL 232
PPP+P+KKS RLA GL
Sbjct: 984 PPPVPAKKSRERLANGL 1000
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCIKH*CKSILVIVQRMSC 418
A P ++G+ P PST L P++ +H K + +++SC
Sbjct: 1038 ALAPRPLSGQAPGSPPSTRPPPWLSELPENTSLQEHGVKLGPALTRKVSC 1087
>AL513164-2|CAH73449.1| 1247|Homo sapiens RP3-323M4.1 protein.
Length = 1247
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +2
Query: 185 PPPMPSKKS-IRLAQGL 232
PPP+P+KKS RLA GL
Sbjct: 984 PPPVPAKKSRERLANGL 1000
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCIKH*CKSILVIVQRMSC 418
A P ++G+ P PST L P++ +H K + +++SC
Sbjct: 1038 ALAPRPLSGQAPGSPPSTRPPPWLSELPENTSLQEHGVKLGPALTRKVSC 1087
>AL033378-3|CAI20166.1| 1247|Homo sapiens RP3-323M4.1 protein.
Length = 1247
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +2
Query: 185 PPPMPSKKS-IRLAQGL 232
PPP+P+KKS RLA GL
Sbjct: 984 PPPVPAKKSRERLANGL 1000
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCIKH*CKSILVIVQRMSC 418
A P ++G+ P PST L P++ +H K + +++SC
Sbjct: 1038 ALAPRPLSGQAPGSPPSTRPPPWLSELPENTSLQEHGVKLGPALTRKVSC 1087
>AJ507735-1|CAD47811.1| 1247|Homo sapiens putative adapter and
scaffold protein protein.
Length = 1247
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +2
Query: 185 PPPMPSKKS-IRLAQGL 232
PPP+P+KKS RLA GL
Sbjct: 984 PPPVPAKKSRERLANGL 1000
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCIKH*CKSILVIVQRMSC 418
A P ++G+ P PST L P++ +H K + +++SC
Sbjct: 1038 ALAPRPLSGQAPGSPPSTRPPPWLSELPENTSLQEHGVKLGPALTRKVSC 1087
>BC063279-1|AAH63279.1| 1228|Homo sapiens SASH1 protein protein.
Length = 1228
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +2
Query: 185 PPPMPSKKS-IRLAQGL 232
PPP+P+KKS RLA GL
Sbjct: 965 PPPVPAKKSRERLANGL 981
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCIKH*CKSILVIVQRMSC 418
A P ++G+ P PST L P++ +H K + +++SC
Sbjct: 1019 ALAPRPLSGQAPGSPPSTRPPPWLSELPENTSLQEHGVKLGPALTRKVSC 1068
>AK024403-1|BAB14909.1| 1064|Homo sapiens protein ( Homo sapiens
cDNA FLJ14341 fis, clone THYRO1000343, weakly similar to
ATROPHIN-1. ).
Length = 1064
Score = 25.4 bits (53), Expect(2) = 5.6
Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +2
Query: 185 PPPMPSKKS-IRLAQGL 232
PPP+P+KKS RLA GL
Sbjct: 801 PPPVPAKKSRERLANGL 817
Score = 22.6 bits (46), Expect(2) = 5.6
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCIKH*CKSILVIVQRMSC 418
A P ++G+ P PST L P++ +H K + +++SC
Sbjct: 855 ALAPRPLSGQAPGSPPSTRPPPWLSELPENTSLQEHGVKLGPALTRKVSC 904
>BX537611-1|CAD97798.1| 657|Homo sapiens hypothetical protein
protein.
Length = 657
Score = 25.4 bits (53), Expect(2) = 5.8
Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +2
Query: 185 PPPMPSKKS-IRLAQGL 232
PPP+P+KKS RLA GL
Sbjct: 394 PPPVPAKKSRERLANGL 410
Score = 22.6 bits (46), Expect(2) = 5.8
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 269 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCIKH*CKSILVIVQRMSC 418
A P ++G+ P PST L P++ +H K + +++SC
Sbjct: 448 ALAPRPLSGQAPGSPPSTRPPPWLSELPENTSLQEHGVKLGPALTRKVSC 497
>AK057830-1|BAB71591.1| 165|Homo sapiens protein ( Homo sapiens
cDNA FLJ25101 fis, clone CBR01328. ).
Length = 165
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 170 WTYRVPPPMPSKKSIRLAQGLGGLCW 247
W YR PPP P+ + G+ LCW
Sbjct: 55 WYYRCPPPQPANFCVFTRDGV-SLCW 79
>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
Length = 1183
Score = 29.1 bits (62), Expect = 7.9
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 125 GDSLKQTKRNAGHGVWTYRVPPPMP-SKKSIRLAQGLGGLCWWWI-LYHIATEPEHITGE 298
G +++Q +R+ G P P S+K +R G G C WI + + +P + +
Sbjct: 379 GFTIRQGERSLGSERKQVICTLPEPKSRKQVRKFLGAAGFCRLWIPNFAVLAKPLYEVTK 438
Query: 299 WPYIDPSTWTDEE 337
W +P W ++
Sbjct: 439 WGDREPFEWGSQQ 451
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,662,711
Number of Sequences: 237096
Number of extensions: 1625003
Number of successful extensions: 3462
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3461
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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