Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13p05
         (450 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28971-4|AAK68668.1|  628|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AC024791-7|AAU20833.1|  278|Caenorhabditis elegans Hypothetical ...    27   8.3  

>U28971-4|AAK68668.1|  628|Caenorhabditis elegans Hypothetical
           protein B0244.10 protein.
          Length = 628

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -1

Query: 243 RHFIFVLNLNVRNILI*VSHLHYNAALFSAS 151
           +H++FVL+  + +IL+ +S L   + LFS S
Sbjct: 80  KHYVFVLSRFLSSILVIISLLVLESTLFSES 110


>AC024791-7|AAU20833.1|  278|Caenorhabditis elegans Hypothetical
           protein Y47G6A.15 protein.
          Length = 278

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 10/31 (32%), Positives = 22/31 (70%)
 Frame = +3

Query: 33  RYCQAHILSIYKNFDLRNEYKIK*KNQILRV 125
           R  +A ++S+ +NFD ++   +K +NQ+L++
Sbjct: 82  RQLEAEMVSLKRNFDSQSAELVKSQNQVLKL 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,440,292
Number of Sequences: 27780
Number of extensions: 113564
Number of successful extensions: 168
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)